Gm25013 Gene Detail

Summary

• Symbol
  Gm25013
• Name
  predicted gene, 25013

• Feature Type
  snoRNA gene
• IDs
  MGI:5454790
  NCBI Gene: 115486216
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:120403615-120403742 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  83 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454790	snoRNA gene	Chr3:120403615-120403742 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039131	snoRNA gene	Chr3:122763622-122763749 (-)
A/J	MGP_AJ_G0039127	snoRNA gene	Chr3:118707462-118707589 (-)
AKR/J	MGP_AKRJ_G0039058	snoRNA gene	Chr3:121723172-121723299 (-)
BALB/cJ	MGP_BALBcJ_G0039110	snoRNA gene	Chr3:118524701-118524828 (-)
C3H/HeJ	MGP_C3HHeJ_G0038771	snoRNA gene	Chr3:122112194-122112321 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039658	snoRNA gene	Chr3:127225478-127225605 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036367	snoRNA gene	Chr3:114176020-114176154 (-)
CAST/EiJ	MGP_CASTEiJ_G0037907	snoRNA gene	Chr3:121480816-121480943 (-)
CBA/J	MGP_CBAJ_G0038742	snoRNA gene	Chr3:131569898-131570025 (-)
DBA/2J	MGP_DBA2J_G0038927	snoRNA gene	Chr3:117869090-117869217 (-)
FVB/NJ	MGP_FVBNJ_G0038882	snoRNA gene	Chr3:115480032-115480159 (-)
LP/J	MGP_LPJ_G0038972	snoRNA gene	Chr3:124307649-124307776 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038884	snoRNA gene	Chr3:139205630-139205757 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039757	snoRNA gene	Chr3:121252141-121252268 (-)
PWK/PhJ	MGP_PWKPhJ_G0037595	snoRNA gene	Chr3:117543908-117544035 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037344	snoRNA gene	Chr3:119315034-119315164 (-)
WSB/EiJ	MGP_WSBEiJ_G0038135	snoRNA gene	Chr3:121973681-121973808 (-)

Homology

• Gene Tree
  Gm25013
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089027 (Evidence)
• NCBI Gene
  115486216

Representative Sequences			Length	Strain/Species
genomic	115486216	NCBI Gene Model | MGI Sequence Detail	128	C57BL/6J
transcript	XR_004941749	RefSeq | MGI Sequence Detail	128	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;