Gm25097 Gene Detail

Summary

• Symbol
  Gm25097
• Name
  predicted gene, 25097

• Feature Type
  snRNA gene
• IDs
  MGI:5454874
  NCBI Gene: 115489220
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:143943473-143943617 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454874	snRNA gene	ChrX:143943473-143943617 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038353	snRNA gene	ChrX:142717949-142718093 (+)
A/J	MGP_AJ_G0038346	snRNA gene	ChrX:142049617-142049759 (+)
AKR/J	MGP_AKRJ_G0038285	snRNA gene	ChrX:146679374-146679518 (+)
BALB/cJ	MGP_BALBcJ_G0038330	snRNA gene	ChrX:140259732-140259874 (+)
C3H/HeJ	MGP_C3HHeJ_G0037996	snRNA gene	ChrX:142834241-142834385 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038867	snRNA gene	ChrX:146757255-146757399 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035652	snRNA gene	ChrX:133554074-133554208 (+)
CAST/EiJ	MGP_CASTEiJ_G0037140	snRNA gene	ChrX:123436976-123437118 (+)
CBA/J	MGP_CBAJ_G0037965	snRNA gene	ChrX:151275724-151275868 (+)
DBA/2J	MGP_DBA2J_G0038159	snRNA gene	ChrX:141121872-141122016 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0038198	snRNA gene	ChrX:143672471-143672615 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038104	snRNA gene	ChrX:159135567-159135723 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038974	snRNA gene	ChrX:141996818-141996962 (+)
PWK/PhJ	MGP_PWKPhJ_G0036831	snRNA gene	ChrX:120188977-120189116 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036591	snRNA gene	ChrX:123984547-123984681 (+)
WSB/EiJ	MGP_WSBEiJ_G0037370	snRNA gene	ChrX:140363988-140364132 (+)

Homology

• Gene Tree
  Gm25097
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000077230 (Evidence)
• NCBI Gene
  115489220

Representative Sequences			Length	Strain/Species
genomic	115489220	NCBI Gene Model | MGI Sequence Detail	145	C57BL/6J
transcript	XR_004940525	RefSeq | MGI Sequence Detail	145	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;