Gm25124 Gene Detail

Summary

• Symbol
  Gm25124
• Name
  predicted gene, 25124

• Feature Type
  snRNA gene
• IDs
  MGI:5454901
  NCBI Gene: 115490075
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:101128340-101128503 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454901	snRNA gene	Chr4:101128340-101128503 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037919	snRNA gene	Chr4:101565455-101565618 (+)
A/J	MGP_AJ_G0037905	snRNA gene	Chr4:98018528-98018691 (+)
AKR/J	MGP_AKRJ_G0037844	snRNA gene	Chr4:100383593-100383756 (+)
BALB/cJ	MGP_BALBcJ_G0037891	snRNA gene	Chr4:98220175-98220338 (+)
C3H/HeJ	MGP_C3HHeJ_G0037565	snRNA gene	Chr4:101186602-101186765 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038418	snRNA gene	Chr4:105402320-105402483 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035301	snRNA gene	Chr4:93302240-93302380 (+)
CAST/EiJ	MGP_CASTEiJ_G0036723	snRNA gene	Chr4:98975130-98975300 (+)
CBA/J	MGP_CBAJ_G0037537	snRNA gene	Chr4:108723423-108723586 (+)
DBA/2J	MGP_DBA2J_G0037722	snRNA gene	Chr4:97718364-97718527 (+)
FVB/NJ	MGP_FVBNJ_G0037668	snRNA gene	Chr4:96550963-96551126 (+)
LP/J	MGP_LPJ_G0037767	snRNA gene	Chr4:101865856-101866019 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037679	snRNA gene	Chr4:114263884-114264047 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038530	snRNA gene	Chr4:100644474-100644637 (+)
PWK/PhJ	MGP_PWKPhJ_G0036414	snRNA gene	Chr4:95883430-95883600 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036190	snRNA gene	Chr4:98091841-98092011 (+)
WSB/EiJ	MGP_WSBEiJ_G0036938	snRNA gene	Chr4:100807850-100808013 (+)

Homology

• Gene Tree
  Gm25124
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm25124
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065279 (Evidence)
• NCBI Gene
  115490075

Representative Sequences			Length	Strain/Species
genomic	115490075	NCBI Gene Model | MGI Sequence Detail	164	C57BL/6J
transcript	XR_004942397	RefSeq | MGI Sequence Detail	164	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12