Gm25148 Gene Detail

Summary

• Symbol
  Gm25148
• Name
  predicted gene, 25148

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5454925
  NCBI Gene: 115485907
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:56315413-56315535 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454925	snoRNA gene	Chr13:56315413-56315535 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038705	snoRNA gene	Chr13:55695769-55695891 (+)
A/J	MGP_AJ_G0038698	snoRNA gene	Chr13:53632530-53632652 (+)
AKR/J	MGP_AKRJ_G0038633	snoRNA gene	Chr13:55222238-55222360 (+)
BALB/cJ	MGP_BALBcJ_G0038683	snoRNA gene	Chr13:53864316-53864438 (+)
C3H/HeJ	MGP_C3HHeJ_G0038345	snoRNA gene	Chr13:55029994-55030116 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039228	snoRNA gene	Chr13:57387825-57387947 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037486	snoRNA gene	Chr13:55141438-55141560 (+)
CBA/J	MGP_CBAJ_G0038317	snoRNA gene	Chr13:59586694-59586826 (+)
DBA/2J	MGP_DBA2J_G0038506	snoRNA gene	Chr13:53180821-53180943 (+)
FVB/NJ	MGP_FVBNJ_G0038459	snoRNA gene	Chr13:52647423-52647545 (+)
LP/J	MGP_LPJ_G0038545	snoRNA gene	Chr13:55954072-55954194 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038457	snoRNA gene	Chr13:59002204-59002326 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039331	snoRNA gene	Chr13:54803877-54803999 (+)
PWK/PhJ	MGP_PWKPhJ_G0037172	snoRNA gene	Chr13:53210266-53210388 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036929	snoRNA gene	Chr13:53736497-53736619 (+)
WSB/EiJ	MGP_WSBEiJ_G0037716	snoRNA gene	Chr13:55170642-55170764 (+)

Homology

• Gene Tree
  Gm25148
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000077799 (Evidence)
• NCBI Gene
  115485907

Representative Sequences			Length	Strain/Species
genomic	115485907	NCBI Gene Model | MGI Sequence Detail	123	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;