Gm25176 Gene Detail

Summary

• Symbol
  Gm25176
• Name
  predicted gene, 25176

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5454953
  NCBI Gene: 115489059
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:26237769-26237893 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  71 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5454953	snRNA gene	Chr19:26237731-26237893 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037704	snRNA gene	Chr19:24564166-24564290 (-)
A/J	MGP_AJ_G0037694	snRNA gene	Chr19:23272821-23272945 (-)
AKR/J	MGP_AKRJ_G0037631	snRNA gene	Chr19:24152368-24152492 (-)
BALB/cJ	MGP_BALBcJ_G0037677	snRNA gene	Chr19:23329282-23329406 (-)
C3H/HeJ	MGP_C3HHeJ_G0037350	snRNA gene	Chr19:24133677-24133801 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038202	snRNA gene	Chr19:25280081-25280205 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035121	snRNA gene	Chr19:23343543-23343667 (-)
CAST/EiJ	MGP_CASTEiJ_G0036515	snRNA gene	Chr19:23863984-23864108 (-)
CBA/J	MGP_CBAJ_G0037324	snRNA gene	Chr19:26451307-26451431 (-)
DBA/2J	MGP_DBA2J_G0037506	snRNA gene	Chr19:23258606-23258730 (-)
FVB/NJ	MGP_FVBNJ_G0037452	snRNA gene	Chr19:23108990-23109114 (-)
LP/J	MGP_LPJ_G0037558	snRNA gene	Chr19:24551745-24551869 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037466	snRNA gene	Chr19:26427397-26427521 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038313	snRNA gene	Chr19:24150051-24150175 (-)
PWK/PhJ	MGP_PWKPhJ_G0036211	snRNA gene	Chr19:22876167-22876291 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035996	snRNA gene	Chr19:23387934-23388059 (-)
WSB/EiJ	MGP_WSBEiJ_G0036732	snRNA gene	Chr19:24188207-24188331 (-)

Homology

• Gene Tree
  Gm25176
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084589 (Evidence)
• NCBI Gene
  115489059

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084589	Ensembl Gene Model | MGI Sequence Detail	125	C57BL/6J
transcript	ENSMUST00000122640	Ensembl | MGI Sequence Detail	125	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm25176:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr158701	Chr19:26237890-26237895 (-)	0 bp