Gm25378 Gene Detail

Summary

• Symbol
  Gm25378
• Name
  predicted gene, 25378

• Feature Type
  snoRNA gene
• IDs
  MGI:5455155
  NCBI Gene: 115486267
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:28365316-28365444 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  175 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455155	snoRNA gene	Chr4:28365316-28365444 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039164	snoRNA gene	Chr4:25654725-25654853 (+)
A/J	MGP_AJ_G0039160	snoRNA gene	Chr4:24847638-24847766 (+)
AKR/J	MGP_AKRJ_G0039091	snoRNA gene	Chr4:25413358-25413486 (+)
BALB/cJ	MGP_BALBcJ_G0039143	snoRNA gene	Chr4:24961025-24961153 (+)
C3H/HeJ	MGP_C3HHeJ_G0038804	snoRNA gene	Chr4:25628647-25628775 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039691	snoRNA gene	Chr4:26715838-26715966 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036395	snoRNA gene	Chr4:23022351-23022479 (+)
CAST/EiJ	MGP_CASTEiJ_G0037939	snoRNA gene	Chr4:25353118-25353241 (+)
CBA/J	MGP_CBAJ_G0038775	snoRNA gene	Chr4:27500933-27501061 (+)
DBA/2J	MGP_DBA2J_G0038960	snoRNA gene	Chr4:24780112-24780240 (+)
FVB/NJ	MGP_FVBNJ_G0038915	snoRNA gene	Chr4:24284918-24285046 (+)
LP/J	MGP_LPJ_G0039004	snoRNA gene	Chr4:25784791-25784919 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038916	snoRNA gene	Chr4:29764867-29764995 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039790	snoRNA gene	Chr4:25400294-25400422 (+)
PWK/PhJ	MGP_PWKPhJ_G0037627	snoRNA gene	Chr4:24509066-24509189 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037377	snoRNA gene	Chr4:25170926-25171054 (+)
WSB/EiJ	MGP_WSBEiJ_G0038167	snoRNA gene	Chr4:25415123-25415251 (+)

Homology

• Gene Tree
  Gm25378
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077521 (Evidence)
• NCBI Gene
  115486267

Representative Sequences			Length	Strain/Species
genomic	115486267	NCBI Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	XR_004942371	RefSeq | MGI Sequence Detail	129	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;