Gm25417 Gene Detail

Summary

• Symbol
  Gm25417
• Name
  predicted gene, 25417

• Feature Type
  snoRNA gene
• IDs
  MGI:5455194
  NCBI Gene: 115485705
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:92409631-92409761 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455194	snoRNA gene	Chr9:92409631-92409761 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039550	snoRNA gene	Chr9:93586047-93586177 (-)
A/J	MGP_AJ_G0039549	snoRNA gene	Chr9:90344668-90344798 (-)
AKR/J	MGP_AKRJ_G0039472	snoRNA gene	Chr9:92453443-92453573 (-)
BALB/cJ	MGP_BALBcJ_G0039527	snoRNA gene	Chr9:89987002-89987132 (-)
C3H/HeJ	MGP_C3HHeJ_G0039187	snoRNA gene	Chr9:92920692-92920822 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040079	snoRNA gene	Chr9:96203478-96203608 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036725	snoRNA gene	Chr9:88349855-88349985 (-)
CAST/EiJ	MGP_CASTEiJ_G0038315	snoRNA gene	Chr9:92659838-92659968 (-)
CBA/J	MGP_CBAJ_G0039154	snoRNA gene	Chr9:99567421-99567551 (-)
DBA/2J	MGP_DBA2J_G0039348	snoRNA gene	Chr9:89853762-89853892 (-)
FVB/NJ	MGP_FVBNJ_G0039302	snoRNA gene	Chr9:88816235-88816365 (-)
LP/J	MGP_LPJ_G0039388	snoRNA gene	Chr9:93792353-93792483 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039305	snoRNA gene	Chr9:101501667-101501797 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040176	snoRNA gene	Chr9:92708950-92709080 (-)
PWK/PhJ	MGP_PWKPhJ_G0037992	snoRNA gene	Chr9:90016056-90016186 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037744	snoRNA gene	Chr9:92779434-92779564 (-)
WSB/EiJ	MGP_WSBEiJ_G0038540	snoRNA gene	Chr9:92598253-92598383 (-)

Homology

• Gene Tree
  Gm25417
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077400 (Evidence)
• NCBI Gene
  115485705

Representative Sequences			Length	Strain/Species
genomic	115485705	NCBI Gene Model | MGI Sequence Detail	131	C57BL/6J
transcript	XR_004935949	RefSeq | MGI Sequence Detail	131	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;