Gm25459 Gene Detail

Summary

• Symbol
  Gm25459
• Name
  predicted gene, 25459

• Feature Type
  snoRNA gene
  BioType Conflict
  
• IDs
  MGI:5455236
  NCBI Gene: 115486325
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:22564162-22564275 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455236	snoRNA gene	Chr5:22564162-22564275 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039245	snoRNA gene	Chr5:19950831-19950944 (-)
A/J	MGP_AJ_G0039241	snoRNA gene	Chr5:19307846-19307959 (-)
AKR/J	MGP_AKRJ_G0039171	snoRNA gene	Chr5:20039113-20039226 (-)
BALB/cJ	MGP_BALBcJ_G0039224	snoRNA gene	Chr5:19737630-19737743 (-)
C3H/HeJ	MGP_C3HHeJ_G0038885	snoRNA gene	Chr5:20119052-20119165 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039772	snoRNA gene	Chr5:21388098-21388211 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036469	snoRNA gene	Chr5:17337420-17337533 (-)
CAST/EiJ	MGP_CASTEiJ_G0038018	snoRNA gene	Chr5:19450641-19450754 (-)
CBA/J	MGP_CBAJ_G0038856	snoRNA gene	Chr5:21646555-21646668 (-)
DBA/2J	MGP_DBA2J_G0039041	snoRNA gene	Chr5:19587941-19588054 (-)
FVB/NJ	MGP_FVBNJ_G0038996	snoRNA gene	Chr5:18986275-18986388 (-)
LP/J	MGP_LPJ_G0039085	snoRNA gene	Chr5:20360381-20360494 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038997	snoRNA gene	Chr5:22888819-22888932 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0037704	snoRNA gene	Chr5:18636718-18636831 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037452	snoRNA gene	Chr5:19072976-19073089 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm25459
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000088578 (Evidence)
• NCBI Gene
  115486325

Representative Sequences			Length	Strain/Species
genomic	115486325	NCBI Gene Model | MGI Sequence Detail	114	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;