Gm25475 Gene Detail

Summary

• Symbol
  Gm25475
• Name
  predicted gene, 25475

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5455252
  NCBI Gene: 115487921
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:101288416-101288594 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455252	snRNA gene	Chr11:101288415-101288594 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037351	snRNA gene	Chr11:104255340-104255520 (-)
A/J	MGP_AJ_G0037338	snRNA gene	Chr11:99870478-99870657 (-)
AKR/J	MGP_AKRJ_G0037282	snRNA gene	Chr11:102980170-102980349 (-)
BALB/cJ	MGP_BALBcJ_G0037328	snRNA gene	Chr11:100365693-100365872 (-)
C3H/HeJ	MGP_C3HHeJ_G0037011	snRNA gene	Chr11:103149807-103149987 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037842	snRNA gene	Chr11:107526891-107527070 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036189	snRNA gene	Chr11:104137554-104137734 (-)
CBA/J	MGP_CBAJ_G0036983	snRNA gene	Chr11:111960407-111960586 (-)
DBA/2J	MGP_DBA2J_G0037160	snRNA gene	Chr11:99395996-99396176 (-)
FVB/NJ	MGP_FVBNJ_G0037109	snRNA gene	Chr11:98940834-98941013 (-)
LP/J	MGP_LPJ_G0037209	snRNA gene	Chr11:104798537-104798717 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037120	snRNA gene	Chr11:111519982-111520162 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037960	snRNA gene	Chr11:103304597-103304780 (-)
PWK/PhJ	MGP_PWKPhJ_G0035886	snRNA gene	Chr11:100458109-100458288 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035684	snRNA gene	Chr11:103034746-103034915 (-)
WSB/EiJ	MGP_WSBEiJ_G0036398	snRNA gene	Chr11:103303103-103303286 (-)

Homology

• Gene Tree
  Gm25475
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm25475
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000064759 (Evidence)
• NCBI Gene
  115487921

Representative Sequences			Length	Strain/Species
genomic	115487921	NCBI Gene Model | MGI Sequence Detail	179	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52