Gm25513 Gene Detail

Summary

• Symbol
  Gm25513
• Name
  predicted gene, 25513

• Feature Type
  snRNA gene
• IDs
  MGI:5455290
  NCBI Gene: 115490286
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:55460762-55460923 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455290	snRNA gene	Chr5:55460762-55460923 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0037975	snRNA gene	Chr5:52474400-52474561 (-)
AKR/J	MGP_AKRJ_G0037914	snRNA gene	Chr5:54266879-54267040 (-)
BALB/cJ	MGP_BALBcJ_G0037959	snRNA gene	Chr5:53029666-53029827 (-)
C3H/HeJ	MGP_C3HHeJ_G0037525	snRNA gene	Chr4:22706138-22706299 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038490	snRNA gene	Chr5:56651309-56651470 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0037498	snRNA gene	Chr4:24297167-24297328 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0037736	snRNA gene	Chr5:51863523-51863684 (-)
LP/J	MGP_LPJ_G0037837	snRNA gene	Chr5:54898784-54898945 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0038602	snRNA gene	Chr5:53785259-53785420 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm25513
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  13 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm25513
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  14
• RefSeq
  1

• Ensembl
  ENSMUSG00000065795 (Evidence)
• NCBI Gene
  115490286

Representative Sequences			Length	Strain/Species
genomic	115490286	NCBI Gene Model | MGI Sequence Detail	162	C57BL/6J
transcript	XR_004942839	RefSeq | MGI Sequence Detail	162	C57BL/6J

References

• Summaries
  All 16

  Phenotypes 13
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707