Gm25521 Gene Detail

Summary

• Symbol
  Gm25521
• Name
  predicted gene, 25521

• Feature Type
  snRNA gene
• IDs
  MGI:5455298
  NCBI Gene: 115490261
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:93160891-93160998 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455298	snRNA gene	Chr5:93160891-93160998 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038011	snRNA gene	Chr5:94225431-94225538 (-)
A/J	MGP_AJ_G0037999	snRNA gene	Chr5:90477315-90477422 (-)
AKR/J	MGP_AKRJ_G0037937	snRNA gene	Chr5:93466772-93466879 (-)
BALB/cJ	MGP_BALBcJ_G0037984	snRNA gene	Chr5:91358068-91358175 (-)
C3H/HeJ	MGP_C3HHeJ_G0037656	snRNA gene	Chr5:93849170-93849277 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038513	snRNA gene	Chr5:97966582-97966689 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035376	snRNA gene	Chr5:86111424-86111531 (-)
CAST/EiJ	MGP_CASTEiJ_G0036813	snRNA gene	Chr5:93234632-93234739 (-)
CBA/J	MGP_CBAJ_G0037629	snRNA gene	Chr5:101386979-101387086 (-)
DBA/2J	MGP_DBA2J_G0037814	snRNA gene	Chr5:90530349-90530456 (-)
FVB/NJ	MGP_FVBNJ_G0037761	snRNA gene	Chr5:89388859-89388966 (-)
LP/J	MGP_LPJ_G0037859	snRNA gene	Chr5:94596140-94596247 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037768	snRNA gene	Chr5:106264785-106264892 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038628	snRNA gene	Chr5:92971465-92971572 (-)
PWK/PhJ	MGP_PWKPhJ_G0036503	snRNA gene	Chr5:89595783-89595889 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036274	snRNA gene	Chr5:92317122-92317235 (-)
WSB/EiJ	MGP_WSBEiJ_G0037028	snRNA gene	Chr5:93443292-93443399 (-)

Homology

• Gene Tree
  Gm25521
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089018 (Evidence)
• NCBI Gene
  115490261

Representative Sequences			Length	Strain/Species
genomic	115490261	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004942808	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;