Gm25552 Gene Detail

Summary

• Symbol
  Gm25552
• Name
  predicted gene, 25552

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5455329
  NCBI Gene: 115489201
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:13851624-13851712 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455329	snRNA gene	ChrX:13851624-13851714 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038292	snRNA gene	ChrX:8882104-8882194 (-)
A/J	MGP_AJ_G0038286	snRNA gene	ChrX:8945648-8945738 (-)
AKR/J	MGP_AKRJ_G0038224	snRNA gene	ChrX:9240511-9240601 (-)
BALB/cJ	MGP_BALBcJ_G0038270	snRNA gene	ChrX:8786932-8787022 (-)
C3H/HeJ	MGP_C3HHeJ_G0037937	snRNA gene	ChrX:8954123-8954213 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038806	snRNA gene	ChrX:9062646-9062736 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035609	snRNA gene	ChrX:7798712-7798802 (-)
CAST/EiJ	MGP_CASTEiJ_G0037085	snRNA gene	ChrX:8684001-8684091 (-)
CBA/J	MGP_CBAJ_G0037907	snRNA gene	ChrX:9523790-9523880 (-)
DBA/2J	MGP_DBA2J_G0038098	snRNA gene	ChrX:8769821-8769911 (-)
FVB/NJ	MGP_FVBNJ_G0038046	snRNA gene	ChrX:8605818-8605908 (-)
LP/J	MGP_LPJ_G0038138	snRNA gene	ChrX:9052228-9052318 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038046	snRNA gene	ChrX:9449687-9449777 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038913	snRNA gene	ChrX:8769873-8769963 (-)
PWK/PhJ	MGP_PWKPhJ_G0036776	snRNA gene	ChrX:8259140-8259230 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036539	snRNA gene	ChrX:8857888-8857978 (-)
WSB/EiJ	MGP_WSBEiJ_G0037312	snRNA gene	ChrX:8807034-8807124 (-)

Homology

• Gene Tree
  Gm25552
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000088706 (Evidence)
• NCBI Gene
  115489201

Representative Sequences			Length	Strain/Species
genomic	115489201	NCBI Gene Model | MGI Sequence Detail	89	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;