Gm25627 Gene Detail

Summary

• Symbol
  Gm25627
• Name
  predicted gene, 25627

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5455404
  NCBI Gene: 115489858
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:145821859-145822009 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455404	snRNA gene	Chr3:145821857-145822009 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037865	snRNA gene	Chr3:149591477-149591629 (-)
A/J	MGP_AJ_G0037850	snRNA gene	Chr3:144250647-144250799 (-)
AKR/J	MGP_AKRJ_G0037791	snRNA gene	Chr3:148090889-148091041 (-)
BALB/cJ	MGP_BALBcJ_G0037836	snRNA gene	Chr3:144060639-144060791 (-)
C3H/HeJ	MGP_C3HHeJ_G0037509	snRNA gene	Chr3:148452469-148452621 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038365	snRNA gene	Chr3:154621197-154621349 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035256	snRNA gene	Chr3:139315949-139316095 (-)
CAST/EiJ	MGP_CASTEiJ_G0036672	snRNA gene	Chr3:148429774-148429926 (-)
CBA/J	MGP_CBAJ_G0037482	snRNA gene	Chr3:160102383-160102535 (-)
DBA/2J	MGP_DBA2J_G0037666	snRNA gene	Chr3:143396619-143396771 (-)
FVB/NJ	MGP_FVBNJ_G0037614	snRNA gene	Chr3:140797218-140797370 (-)
LP/J	MGP_LPJ_G0037715	snRNA gene	Chr3:150975635-150975787 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037626	snRNA gene	Chr3:168394894-168395046 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038476	snRNA gene	Chr3:147676991-147677143 (-)
PWK/PhJ	MGP_PWKPhJ_G0036365	snRNA gene	Chr3:143238282-143238434 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036143	snRNA gene	Chr3:145850826-145850978 (-)
WSB/EiJ	MGP_WSBEiJ_G0036886	snRNA gene	Chr3:148639494-148639646 (-)

Homology

• Gene Tree
  Gm25627
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000065937 (Evidence)
• NCBI Gene
  115489858

Representative Sequences			Length	Strain/Species
genomic	115489858	NCBI Gene Model | MGI Sequence Detail	151	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;