Gm25721 Gene Detail

Summary

• Symbol
  Gm25721
• Name
  predicted gene, 25721

• Feature Type
  snRNA gene
• IDs
  MGI:5455498
  NCBI Gene: 115490301
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:103806103-103806273 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455498	snRNA gene	Chr5:103806103-103806273 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038016	snRNA gene	Chr5:105296685-105296855 (+)
A/J	MGP_AJ_G0038004	snRNA gene	Chr5:101342504-101342674 (+)
AKR/J	MGP_AKRJ_G0037942	snRNA gene	Chr5:104610338-104610508 (+)
BALB/cJ	MGP_BALBcJ_G0037989	snRNA gene	Chr5:102403150-102403320 (+)
C3H/HeJ	MGP_C3HHeJ_G0037661	snRNA gene	Chr5:105016777-105016947 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038518	snRNA gene	Chr5:109591394-109591564 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035381	snRNA gene	Chr5:96488093-96488250 (+)
CAST/EiJ	MGP_CASTEiJ_G0036817	snRNA gene	Chr5:103720395-103720565 (+)
CBA/J	MGP_CBAJ_G0037634	snRNA gene	Chr5:113414532-113414702 (+)
DBA/2J	MGP_DBA2J_G0037819	snRNA gene	Chr5:101533807-101533977 (+)
FVB/NJ	MGP_FVBNJ_G0037766	snRNA gene	Chr5:100334599-100334769 (+)
LP/J	MGP_LPJ_G0037864	snRNA gene	Chr5:105869836-105870006 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037773	snRNA gene	Chr5:118361514-118361684 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038633	snRNA gene	Chr5:104147808-104147978 (+)
PWK/PhJ	MGP_PWKPhJ_G0036508	snRNA gene	Chr5:99986170-99986340 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036279	snRNA gene	Chr5:101798870-101799040 (+)
WSB/EiJ	MGP_WSBEiJ_G0037033	snRNA gene	Chr5:104514680-104514850 (+)

Homology

• Gene Tree
  Gm25721
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088121 (Evidence)
• NCBI Gene
  115490301

Representative Sequences			Length	Strain/Species
genomic	115490301	NCBI Gene Model | MGI Sequence Detail	171	C57BL/6J
transcript	XR_004942867	RefSeq | MGI Sequence Detail	171	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;