Gm25812 Gene Detail

Summary

• Symbol
  Gm25812
• Name
  predicted gene, 25812

• Feature Type
  snRNA gene
• IDs
  MGI:5455589
  NCBI Gene: 115489282
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:22300653-22300755 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  57 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455589	snRNA gene	ChrX:22300653-22300755 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038300	snRNA gene	ChrX:17330899-17331001 (+)
A/J	MGP_AJ_G0038294	snRNA gene	ChrX:17397062-17397164 (+)
AKR/J	MGP_AKRJ_G0038232	snRNA gene	ChrX:18044193-18044295 (+)
BALB/cJ	MGP_BALBcJ_G0038278	snRNA gene	ChrX:17195218-17195320 (+)
C3H/HeJ	MGP_C3HHeJ_G0037945	snRNA gene	ChrX:17574961-17575063 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038815	snRNA gene	ChrX:17820265-17820367 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037092	snRNA gene	ChrX:16843811-16843913 (+)
CBA/J	MGP_CBAJ_G0037915	snRNA gene	ChrX:18633561-18633663 (+)
DBA/2J	MGP_DBA2J_G0038106	snRNA gene	ChrX:17247099-17247201 (+)
FVB/NJ	MGP_FVBNJ_G0038054	snRNA gene	ChrX:17109695-17109797 (+)
LP/J	MGP_LPJ_G0038146	snRNA gene	ChrX:17619292-17619394 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038054	snRNA gene	ChrX:18970931-18971033 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038921	snRNA gene	ChrX:17295765-17295867 (+)
PWK/PhJ	MGP_PWKPhJ_G0036784	snRNA gene	ChrX:16346474-16346576 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0037320	snRNA gene	ChrX:17129688-17129790 (+)

Homology

• Gene Tree
  Gm25812
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000064685 (Evidence)
• NCBI Gene
  115489282

Representative Sequences			Length	Strain/Species
genomic	115489282	NCBI Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	XR_004940591	RefSeq | MGI Sequence Detail	103	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;