Snora57 Gene Detail

Summary

• Symbol
  Snora57
• Name
  small nucleolar RNA, H/ACA box 57
• Synonyms
  Gm25822

• Feature Type
  snoRNA gene
• IDs
  MGI:5455599
  NCBI Gene: 118027464
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:8865902-8866049 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455599	snoRNA gene	Chr19:8865900-8866049 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038958	snoRNA gene	Chr19:6172811-6172958 (-)
A/J	MGP_AJ_G0038953	snoRNA gene	Chr19:5840445-5840592 (-)
AKR/J	MGP_AKRJ_G0038888	snoRNA gene	Chr19:5936398-5936545 (-)
BALB/cJ	MGP_BALBcJ_G0038936	snoRNA gene	Chr19:5947451-5947598 (-)
C3H/HeJ	MGP_C3HHeJ_G0038600	snoRNA gene	Chr19:6022342-6022489 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039486	snoRNA gene	Chr19:6309216-6309363 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036211	snoRNA gene	Chr19:6094668-6094815 (-)
CAST/EiJ	MGP_CASTEiJ_G0037741	snoRNA gene	Chr19:5674554-5674701 (-)
CBA/J	MGP_CBAJ_G0038571	snoRNA gene	Chr19:6418810-6418957 (-)
DBA/2J	MGP_DBA2J_G0038760	snoRNA gene	Chr19:5673081-5673228 (-)
FVB/NJ	MGP_FVBNJ_G0038712	snoRNA gene	Chr19:5745882-5746029 (-)
LP/J	MGP_LPJ_G0038800	snoRNA gene	Chr19:6067831-6067978 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038713	snoRNA gene	Chr19:6282963-6283110 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039586	snoRNA gene	Chr19:5981395-5981542 (-)
PWK/PhJ	MGP_PWKPhJ_G0037425	snoRNA gene	Chr19:5347835-5347982 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0037969	snoRNA gene	Chr19:5953659-5953806 (-)

Homology

• Gene Tree
  Snora57
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000070167 (Evidence)
• NCBI Gene
  118027464

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000070167	Ensembl Gene Model | MGI Sequence Detail	148	C57BL/6J
transcript	ENSMUST00000093658	Ensembl | MGI Sequence Detail	148	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;