Gm25853 Gene Detail

Summary

• Symbol
  Gm25853
• Name
  predicted gene, 25853

• Feature Type
  snoRNA gene
• IDs
  MGI:5455630
  NCBI Gene: 115488685
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:54174825-54174956 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455630	snoRNA gene	Chr16:54174825-54174956 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038861	snoRNA gene	Chr16:53394962-53395093 (+)
A/J	MGP_AJ_G0038854	snoRNA gene	Chr16:51080965-51081096 (+)
AKR/J	MGP_AKRJ_G0038790	snoRNA gene	Chr16:52733392-52733523 (+)
BALB/cJ	MGP_BALBcJ_G0038839	snoRNA gene	Chr16:51181527-51181658 (+)
C3H/HeJ	MGP_C3HHeJ_G0038502	snoRNA gene	Chr16:52882104-52882235 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039386	snoRNA gene	Chr16:54861293-54861424 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036123	snoRNA gene	Chr16:50910863-50910994 (+)
CAST/EiJ	MGP_CASTEiJ_G0037643	snoRNA gene	Chr16:53320178-53320309 (+)
CBA/J	MGP_CBAJ_G0038474	snoRNA gene	Chr16:57041592-57041723 (+)
DBA/2J	MGP_DBA2J_G0038662	snoRNA gene	Chr16:50819385-50819516 (+)
FVB/NJ	MGP_FVBNJ_G0038615	snoRNA gene	Chr16:50631733-50631864 (+)
LP/J	MGP_LPJ_G0038702	snoRNA gene	Chr16:53180781-53180912 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038614	snoRNA gene	Chr16:57260847-57260978 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039489	snoRNA gene	Chr16:52865361-52865492 (+)
PWK/PhJ	MGP_PWKPhJ_G0037328	snoRNA gene	Chr16:51178550-51178681 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037085	snoRNA gene	Chr16:52665699-52665830 (+)
WSB/EiJ	MGP_WSBEiJ_G0037871	snoRNA gene	Chr16:52887844-52887975 (+)

Homology

• Gene Tree
  Gm25853
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064727 (Evidence)
• NCBI Gene
  115488685

Representative Sequences			Length	Strain/Species
genomic	115488685	NCBI Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	XR_004939371	RefSeq | MGI Sequence Detail	132	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;