Gm25894 Gene Detail

Summary

• Symbol
  Gm25894
• Name
  predicted gene, 25894

• Feature Type
  snoRNA gene
• IDs
  MGI:5455671
  NCBI Gene: 115489084
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:8701615-8701689 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455671	snoRNA gene	Chr19:8701615-8701689 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038951	snoRNA gene	Chr19:5992684-5992758 (+)
A/J	MGP_AJ_G0038946	snoRNA gene	Chr19:5675947-5676021 (+)
AKR/J	MGP_AKRJ_G0038881	snoRNA gene	Chr19:5762014-5762088 (+)
BALB/cJ	MGP_BALBcJ_G0038929	snoRNA gene	Chr19:5778726-5778800 (+)
C3H/HeJ	MGP_C3HHeJ_G0038593	snoRNA gene	Chr19:5845300-5845374 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039479	snoRNA gene	Chr19:6112977-6113051 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036204	snoRNA gene	Chr19:5916509-5916583 (+)
CAST/EiJ	MGP_CASTEiJ_G0037734	snoRNA gene	Chr19:5493104-5493178 (+)
CBA/J	MGP_CBAJ_G0038564	snoRNA gene	Chr19:6225570-6225644 (+)
DBA/2J	MGP_DBA2J_G0038753	snoRNA gene	Chr19:5506060-5506134 (+)
FVB/NJ	MGP_FVBNJ_G0038705	snoRNA gene	Chr19:5581768-5581842 (+)
LP/J	MGP_LPJ_G0038793	snoRNA gene	Chr19:5884411-5884485 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038706	snoRNA gene	Chr19:6100996-6101070 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039580	snoRNA gene	Chr19:5805400-5805474 (+)
PWK/PhJ	MGP_PWKPhJ_G0037418	snoRNA gene	Chr19:5171594-5171668 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037173	snoRNA gene	Chr19:5405129-5405203 (+)
WSB/EiJ	MGP_WSBEiJ_G0037962	snoRNA gene	Chr19:5771374-5771448 (+)

Homology

• Gene Tree
  Gm25894
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065392 (Evidence)
• NCBI Gene
  115489084

Representative Sequences			Length	Strain/Species
genomic	115489084	NCBI Gene Model | MGI Sequence Detail	75	C57BL/6J
transcript	XR_004940304	RefSeq | MGI Sequence Detail	75	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm25894:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr154802	Chr19:8701477-8701507 (+)	-123 bp