Gm25930 Gene Detail

Summary

• Symbol
  Gm25930
• Name
  predicted gene, 25930

• Feature Type
  snRNA gene
• IDs
  MGI:5455707
  NCBI Gene: 115487843
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:53281229-53281335 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455707	snRNA gene	Chr11:53281229-53281335 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037307	snRNA gene	Chr11:52770550-52770656 (+)
A/J	MGP_AJ_G0037293	snRNA gene	Chr11:50791557-50791663 (+)
AKR/J	MGP_AKRJ_G0037239	snRNA gene	Chr11:52447054-52447160 (+)
BALB/cJ	MGP_BALBcJ_G0037284	snRNA gene	Chr11:51147244-51147350 (+)
C3H/HeJ	MGP_C3HHeJ_G0036967	snRNA gene	Chr11:52416181-52416287 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037799	snRNA gene	Chr11:54364797-54364903 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036146	snRNA gene	Chr11:52463538-52463644 (+)
CBA/J	MGP_CBAJ_G0036940	snRNA gene	Chr11:56928668-56928774 (+)
DBA/2J	MGP_DBA2J_G0037117	snRNA gene	Chr11:50539811-50539917 (+)
FVB/NJ	MGP_FVBNJ_G0037065	snRNA gene	Chr11:50177984-50178090 (+)
LP/J	MGP_LPJ_G0037166	snRNA gene	Chr11:53226032-53226138 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037076	snRNA gene	Chr11:58258601-58258695 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037916	snRNA gene	Chr11:52474797-52474903 (+)
PWK/PhJ	MGP_PWKPhJ_G0035844	snRNA gene	Chr11:51051177-51051283 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035643	snRNA gene	Chr11:52293306-52293412 (+)
WSB/EiJ	MGP_WSBEiJ_G0036356	snRNA gene	Chr11:52110442-52110548 (+)

Homology

• Gene Tree
  Gm25930
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000064719 (Evidence)
• NCBI Gene
  115487843

Representative Sequences			Length	Strain/Species
genomic	115487843	NCBI Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	XR_004937296	RefSeq | MGI Sequence Detail	107	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;