Gm25968 Gene Detail

Summary

• Symbol
  Gm25968
• Name
  predicted gene, 25968

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5455745
  NCBI Gene: 115487861
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:87585308-87585407 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455745	snRNA gene	Chr11:87585308-87585407 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037340	snRNA gene	Chr11:89325884-89325983 (-)
A/J	MGP_AJ_G0037326	snRNA gene	Chr11:85878150-85878249 (-)
AKR/J	MGP_AKRJ_G0037271	snRNA gene	Chr11:88447118-88447217 (-)
BALB/cJ	MGP_BALBcJ_G0037316	snRNA gene	Chr11:86280654-86280753 (-)
C3H/HeJ	MGP_C3HHeJ_G0037000	snRNA gene	Chr11:88486845-88486944 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037831	snRNA gene	Chr11:92028427-92028526 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034839	snRNA gene	Chr11:82908043-82908142 (-)
CAST/EiJ	MGP_CASTEiJ_G0036177	snRNA gene	Chr11:89180685-89180784 (-)
CBA/J	MGP_CBAJ_G0036972	snRNA gene	Chr11:95894710-95894848 (-)
DBA/2J	MGP_DBA2J_G0037149	snRNA gene	Chr11:85432946-85433045 (-)
FVB/NJ	MGP_FVBNJ_G0037098	snRNA gene	Chr11:84939821-84939920 (-)
LP/J	MGP_LPJ_G0037198	snRNA gene	Chr11:89814161-89814260 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037108	snRNA gene	Chr11:95946262-95946361 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037949	snRNA gene	Chr11:88690392-88690491 (-)
PWK/PhJ	MGP_PWKPhJ_G0035875	snRNA gene	Chr11:86282084-86282183 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0036388	snRNA gene	Chr11:88572790-88572889 (-)

Homology

• Gene Tree
  Gm25968
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm25968
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087792 (Evidence)
• NCBI Gene
  115487861

Representative Sequences			Length	Strain/Species
genomic	115487861	NCBI Gene Model | MGI Sequence Detail	100	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52