Gm26040 Gene Detail

Summary

• Symbol
  Gm26040
• Name
  predicted gene, 26040

• Feature Type
  snoRNA gene
• IDs
  MGI:5455817
  NCBI Gene: 115486237
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:27922262-27922422 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  112 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455817	snoRNA gene	Chr3:27922262-27922422 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039080	snoRNA gene	Chr3:25229130-25229290 (+)
A/J	MGP_AJ_G0039076	snoRNA gene	Chr3:25008600-25008760 (+)
AKR/J	MGP_AKRJ_G0039007	snoRNA gene	Chr3:25343820-25343980 (+)
BALB/cJ	MGP_BALBcJ_G0039059	snoRNA gene	Chr3:24693392-24693552 (+)
C3H/HeJ	MGP_C3HHeJ_G0038720	snoRNA gene	Chr3:25389478-25389638 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039607	snoRNA gene	Chr3:26604595-26604755 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036319	snoRNA gene	Chr3:23016088-23016248 (+)
CAST/EiJ	MGP_CASTEiJ_G0037858	snoRNA gene	Chr3:25230072-25230232 (+)
CBA/J	MGP_CBAJ_G0038691	snoRNA gene	Chr3:27328089-27328249 (+)
DBA/2J	MGP_DBA2J_G0038877	snoRNA gene	Chr3:24553690-24553850 (+)
FVB/NJ	MGP_FVBNJ_G0038832	snoRNA gene	Chr3:24028139-24028299 (+)
LP/J	MGP_LPJ_G0038921	snoRNA gene	Chr3:25896516-25896676 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038833	snoRNA gene	Chr3:29872835-29872995 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039707	snoRNA gene	Chr3:25076782-25076942 (+)
PWK/PhJ	MGP_PWKPhJ_G0037545	snoRNA gene	Chr3:24026538-24026698 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037295	snoRNA gene	Chr3:24600740-24600900 (+)
WSB/EiJ	MGP_WSBEiJ_G0038084	snoRNA gene	Chr3:25126831-25126991 (+)

Homology

• Gene Tree
  Gm26040
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088772 (Evidence)
• NCBI Gene
  115486237

Representative Sequences			Length	Strain/Species
genomic	115486237	NCBI Gene Model | MGI Sequence Detail	161	C57BL/6J
transcript	XR_004941762	RefSeq | MGI Sequence Detail	161	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;