Gm26254 Gene Detail

Summary

• Symbol
  Gm26254
• Name
  predicted gene, 26254

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5456031
  NCBI Gene: 115490085
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:31998624-31998741 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456031	snRNA gene	Chr4:31998586-31998741 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037884	snRNA gene	Chr4:29442744-29442861 (-)
A/J	MGP_AJ_G0037869	snRNA gene	Chr4:28401477-28401594 (-)
AKR/J	MGP_AKRJ_G0037810	snRNA gene	Chr4:29142256-29142373 (-)
BALB/cJ	MGP_BALBcJ_G0037855	snRNA gene	Chr4:28644843-28644960 (-)
C3H/HeJ	MGP_C3HHeJ_G0037529	snRNA gene	Chr4:29421626-29421743 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038383	snRNA gene	Chr4:30613702-30613819 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035273	snRNA gene	Chr4:26454754-26454874 (-)
CAST/EiJ	MGP_CASTEiJ_G0036689	snRNA gene	Chr4:29182389-29182506 (-)
CBA/J	MGP_CBAJ_G0037502	snRNA gene	Chr4:31578151-31578268 (-)
DBA/2J	MGP_DBA2J_G0037686	snRNA gene	Chr4:28413449-28413566 (-)
FVB/NJ	MGP_FVBNJ_G0037633	snRNA gene	Chr4:27835179-27835296 (-)
LP/J	MGP_LPJ_G0037733	snRNA gene	Chr4:29528379-29528496 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037644	snRNA gene	Chr4:34215827-34215944 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038495	snRNA gene	Chr4:29143690-29143807 (-)
PWK/PhJ	MGP_PWKPhJ_G0036381	snRNA gene	Chr4:28357642-28357759 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036159	snRNA gene	Chr4:28994877-28994994 (-)
WSB/EiJ	MGP_WSBEiJ_G0036903	snRNA gene	Chr4:29142688-29142805 (-)

Homology

• Gene Tree
  Gm26254
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084440 (Evidence)
• NCBI Gene
  115490085

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084440	Ensembl Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	ENSMUST00000122491	Ensembl | MGI Sequence Detail	118	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26254:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr41133	Chr4:31998738-31998742 (-)	1 bp