Gm26330 Gene Detail

Summary

• Symbol
  Gm26330
• Name
  predicted gene, 26330
• Synonyms
  Snord46

• Feature Type
  snoRNA gene
• IDs
  MGI:5456107
  NCBI Gene: 115490046
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:117012383-117012486 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456107	snoRNA gene	Chr4:117012383-117012486 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0039214	snoRNA gene	Chr4:118117652-118117755 (-)
A/J	MGP_AJ_G0039210	snoRNA gene	Chr4:113565504-113565607 (-)
AKR/J	MGP_AKRJ_G0039140	snoRNA gene	Chr4:116045682-116045785 (-)
BALB/cJ	MGP_BALBcJ_G0039193	snoRNA gene	Chr4:114195504-114195607 (-)
C3H/HeJ	MGP_C3HHeJ_G0038854	snoRNA gene	Chr4:117611641-117611744 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039741	snoRNA gene	Chr4:122678833-122678936 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036439	snoRNA gene	Chr4:107608218-107608321 (-)
CAST/EiJ	MGP_CASTEiJ_G0037987	snoRNA gene	Chr4:114828720-114828823 (-)
CBA/J	MGP_CBAJ_G0038825	snoRNA gene	Chr4:126031255-126031358 (-)
DBA/2J	MGP_DBA2J_G0039010	snoRNA gene	Chr4:114201665-114201768 (-)
FVB/NJ	MGP_FVBNJ_G0038965	snoRNA gene	Chr4:112701432-112701535 (-)
LP/J	MGP_LPJ_G0039054	snoRNA gene	Chr4:118297653-118297756 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038966	snoRNA gene	Chr4:130978860-130978963 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039840	snoRNA gene	Chr4:117193677-117193780 (-)
PWK/PhJ	MGP_PWKPhJ_G0037673	snoRNA gene	Chr4:110999789-110999892 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037422	snoRNA gene	Chr4:113493075-113493178 (-)
WSB/EiJ	MGP_WSBEiJ_G0038215	snoRNA gene	Chr4:117063750-117063853 (-)

Homology

• Gene Tree
  Gm26330
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  19 phenotypes from 1 allele in 1 genetic background
  4 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm26330
• Find Mice (IMSR)
  0 strains or lines available
• Comparison Matrix
  Gene Expression + Phenotype

Homozygosity for the r.11G>A mutation leads to obesity, reduced energy expenditure and lower numbers of NK cells.

Expression

• Assay Results
  706

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064751 (Evidence)
• NCBI Gene
  115490046

Representative Sequences			Length	Strain/Species
genomic	115490046	NCBI Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	XR_004942330	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 4
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:341056 Zhang Y, et al., Molecular mechanisms of snoRNA-IL-15 crosstalk in adipocyte lipolysis and NK cell rejuvenation. Cell Metab. 2023 Aug 8;35(8):1457-1473.e13