Gm26377 Gene Detail

Summary

• Symbol
  Gm26377
• Name
  predicted gene, 26377

• Feature Type
  miRNA gene
• IDs
  MGI:5456154
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:78385810-78385917 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456154	miRNA gene	Chr9:78385810-78385917 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0008423	miRNA gene	Chr19:5132315-5132415 (-)
A/J	MGP_AJ_G0009204	miRNA gene	Chr9:76263857-76263953 (-)
AKR/J	MGP_AKRJ_G0008397	miRNA gene	Chr19:4919317-4919424 (-)
BALB/cJ	MGP_BALBcJ_G0008398	miRNA gene	Chr19:5285508-5285615 (-)
C3H/HeJ	MGP_C3HHeJ_G0008274	miRNA gene	Chr17:81292022-81292122 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0008530	miRNA gene	Chr17:84667664-84667775 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008285	miRNA gene	Chr9:75485105-75485213 (-)
CAST/EiJ	MGP_CASTEiJ_G0008139	miRNA gene	Chr17:81895369-81895478 (-)
CBA/J	MGP_CBAJ_G0008307	miRNA gene	Chr19:5722326-5722433 (-)
DBA/2J	MGP_DBA2J_G0008341	miRNA gene	Chr19:5011894-5012001 (-)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0008360	miRNA gene	Chr17:82533466-82533563 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0008060	miRNA gene	Chr17:77199211-77199314 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007947	miRNA gene	Chr17:77658291-77658403 (-)
WSB/EiJ	MGP_WSBEiJ_G0008220	miRNA gene	Chr17:81679518-81679627 (-)

Homology

• Gene Tree
  Gm26377
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm26377
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000076138 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000076138	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00000102184	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 6

  Phenotypes 5
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75

TSS for Gm26377:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr90644	Chr9:78386330-78386350 (-)	-423 bp