Gm26439 Gene Detail

Summary

• Symbol
  Gm26439
• Name
  predicted gene, 26439

• Feature Type
  snRNA gene
• IDs
  MGI:5456216
  NCBI Gene: 115487852
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:86328136-86328241 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5456216	snRNA gene	Chr11:86328136-86328241 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037335	snRNA gene	Chr11:87991274-87991379 (-)
A/J	MGP_AJ_G0037321	snRNA gene	Chr11:84605449-84605554 (-)
AKR/J	MGP_AKRJ_G0037266	snRNA gene	Chr11:87140458-87140563 (-)
BALB/cJ	MGP_BALBcJ_G0037311	snRNA gene	Chr11:84996872-84996977 (-)
C3H/HeJ	MGP_C3HHeJ_G0036995	snRNA gene	Chr11:87168424-87168529 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037826	snRNA gene	Chr11:90655303-90655408 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034834	snRNA gene	Chr11:81640142-81640247 (-)
CAST/EiJ	MGP_CASTEiJ_G0036173	snRNA gene	Chr11:87841892-87841997 (-)
CBA/J	MGP_CBAJ_G0036967	snRNA gene	Chr11:94467073-94467178 (-)
DBA/2J	MGP_DBA2J_G0037144	snRNA gene	Chr11:84180975-84181080 (-)
FVB/NJ	MGP_FVBNJ_G0037093	snRNA gene	Chr11:83685047-83685152 (-)
LP/J	MGP_LPJ_G0037193	snRNA gene	Chr11:88480456-88480561 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037103	snRNA gene	Chr11:94585026-94585131 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037944	snRNA gene	Chr11:87388905-87389010 (-)
PWK/PhJ	MGP_PWKPhJ_G0035870	snRNA gene	Chr11:84976376-84976481 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035669	snRNA gene	Chr11:86938141-86938246 (-)
WSB/EiJ	MGP_WSBEiJ_G0036383	snRNA gene	Chr11:87260548-87260653 (-)

Homology

• Gene Tree
  Gm26439
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm26439
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064526 (Evidence)
• NCBI Gene
  115487852

Representative Sequences			Length	Strain/Species
genomic	115487852	NCBI Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	XR_004937305	RefSeq | MGI Sequence Detail	106	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52