Gm26583 Gene Detail

Summary

• Symbol
  Gm26583
• Name
  predicted gene, 26583

• Feature Type
  lncRNA gene
• IDs
  MGI:5477077
  NCBI Gene: 328166
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:112909983-112914132 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  204 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477077	lncRNA gene	Chr12:112909983-112914132 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005419	lincRNA gene	Chr12:115429435-115433584 (-)
A/J	MGP_AJ_G0005402	lincRNA gene	Chr12:110963446-110967611 (-)
AKR/J	MGP_AKRJ_G0005382	lincRNA gene	Chr12:114189639-114193806 (-)
BALB/cJ	MGP_BALBcJ_G0005384	lincRNA gene	Chr12:111428289-111432438 (-)
C3H/HeJ	MGP_C3HHeJ_G0005332	lincRNA gene	Chr12:114700402-114704569 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0005538	lincRNA gene	Chr12:118981633-118985782 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004923	lincRNA gene	Chr12:107400603-107404787 (-)
CAST/EiJ	MGP_CASTEiJ_G0005277	lincRNA gene	Chr12:109547490-109551656 (-)
CBA/J	MGP_CBAJ_G0005321	lincRNA gene	Chr12:123534823-123538990 (-)
DBA/2J	MGP_DBA2J_G0005338	lincRNA gene	Chr12:110464719-110468868 (-)
FVB/NJ	MGP_FVBNJ_G0005364	lincRNA gene	Chr12:109291025-109295189 (-)
LP/J	MGP_LPJ_G0005421	lincRNA gene	Chr12:115252774-115256923 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005346	lincRNA gene	Chr12:126633954-126638103 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005538	lincRNA gene	Chr12:113702988-113707153 (-)
PWK/PhJ	MGP_PWKPhJ_G0005226	lincRNA gene	Chr12:105120284-105124448 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0005147	lincRNA gene	Chr12:107879535-107883731 (-)
WSB/EiJ	MGP_WSBEiJ_G0005327	lincRNA gene	Chr12:114614089-114618254 (-)

Homology

• Gene Tree
  Gm26583
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000097476 (Evidence)
• NCBI Gene
  328166

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097476	Ensembl Gene Model | MGI Sequence Detail	4150	C57BL/6J
transcript	ENSMUST00000181436	Ensembl | MGI Sequence Detail	3684	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26583:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117925	Chr12:112915197-112915202 (-)	-1,068 bp