Gm26587 Pseudogene Detail

Summary

• Symbol
  Gm26587
• Name
  predicted gene, 26587

• Feature Type
  pseudogene
• IDs
  MGI:5477081
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:67808576-67809564 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  147 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477081	pseudogene	Chr13:67808576-67809564 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011030	pseudogene	Chr13:67824796-67825602 (+)
A/J	MGP_AJ_G0011033	pseudogene	Chr13:65397414-65398212 (+)
AKR/J	MGP_AKRJ_G0010987	pseudogene	Chr13:67574602-67575428 (+)
BALB/cJ	MGP_BALBcJ_G0011008	pseudogene	Chr13:65872544-65873354 (+)
C3H/HeJ	MGP_C3HHeJ_G0010906	pseudogene	Chr13:67180781-67181616 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011288	pseudogene	Chr13:70237222-70238210 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010878	pseudogene	Chr13:72764833-72765692 (+)
DBA/2J	MGP_DBA2J_G0010924	pseudogene	Chr13:65290409-65291268 (+)
FVB/NJ	MGP_FVBNJ_G0010935	pseudogene	Chr13:64287513-64288334 (+)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0010920	pseudogene	Chr13:71597211-71598030 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011267	pseudogene	Chr13:66802292-66803192 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010777	pseudogene	Chr13:67375990-67376846 (+)

Homology

• Gene Tree
  Gm26587
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26587
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000097470 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097470	Ensembl Gene Model | MGI Sequence Detail	989	C57BL/6J
transcript	ENSMUST00000180795	Ensembl | MGI Sequence Detail	989	Not Applicable

References

• Summaries
  All 4

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69

TSS for Gm26587:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr120256	Chr13:67808489-67808494 (+)	-84 bp