Gm26629 Gene Detail

Summary

• Symbol
  Gm26629
• Name
  predicted gene, 26629

• Feature Type
  lncRNA gene
• IDs
  MGI:5477123
  NCBI Gene: 102631841
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr19:50665843-50767098 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3519 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477123	lncRNA gene	Chr19:50665843-50767100 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005841	lincRNA gene	Chr19:50688788-50794513 (+)
A/J	MGP_AJ_G0005833	lincRNA gene	Chr19:48163204-48267904 (+)
AKR/J	MGP_AKRJ_G0005808	lincRNA gene	Chr19:49717309-49819032 (+)
BALB/cJ	MGP_BALBcJ_G0005812	lincRNA gene	Chr19:48219418-48323090 (+)
C3H/HeJ	MGP_C3HHeJ_G0005759	lincRNA gene	Chr19:49869998-49979591 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005972	lincRNA gene	Chr19:51887243-52006417 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005311	lincRNA gene	Chr19:47238933-47340065 (+)
CAST/EiJ	MGP_CASTEiJ_G0005696	lincRNA gene	Chr19:49756485-49863813 (+)
CBA/J	MGP_CBAJ_G0005744	lincRNA gene	Chr19:54467286-54589561 (+)
DBA/2J	MGP_DBA2J_G0005765	lincRNA gene	Chr19:47971535-48073668 (+)
FVB/NJ	MGP_FVBNJ_G0005791	lincRNA gene	Chr19:47724362-47824134 (+)
LP/J	MGP_LPJ_G0005845	lincRNA gene	Chr19:50547272-50654017 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005778	lincRNA gene	Chr19:53767677-53883849 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005969	lincRNA gene	Chr19:49856659-49963242 (+)
PWK/PhJ	MGP_PWKPhJ_G0005645	lincRNA gene	Chr19:47906821-48009267 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005558	lincRNA gene	Chr19:48550991-48646835 (+)
WSB/EiJ	MGP_WSBEiJ_G0005749	lincRNA gene	Chr19:49983131-50094539 (+)

Homology

• Gene Tree
  Gm26629
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000097446 (Evidence)
• NCBI Gene
  102631841

Representative Sequences			Length	Strain/Species
genomic	102631841	NCBI Gene Model | MGI Sequence Detail	101256	C57BL/6J
transcript	NR_166832	RefSeq | MGI Sequence Detail	2275	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26629:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr156928	Chr19:50667367-50667374 (+)	1,528 bp