Gm26684 Gene Detail

Summary

• Symbol
  Gm26684
• Name
  predicted gene, 26684

• Feature Type
  lncRNA gene
• IDs
  MGI:5477178
  NCBI Gene: 102638507
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr15:54816344-54834101 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  495 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477178	lncRNA gene	Chr15:54815466-54834488 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005601	lincRNA gene	Chr15:54016858-54028475 (+)
A/J	MGP_AJ_G0005587	lincRNA gene	Chr15:51874577-51887056 (+)
AKR/J	MGP_AKRJ_G0005566	lincRNA gene	Chr15:53343639-53355290 (+)
BALB/cJ	MGP_BALBcJ_G0005568	lincRNA gene	Chr15:52099433-52111113 (+)
C3H/HeJ	MGP_C3HHeJ_G0005515	lincRNA gene	Chr15:53430277-53441909 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005725	lincRNA gene	Chr15:56114984-56130332 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005091	lincRNA gene	Chr15:49113471-49124423 (+)
CAST/EiJ	MGP_CASTEiJ_G0005458	lincRNA gene	Chr15:54014736-54025957 (+)
CBA/J	MGP_CBAJ_G0005505	lincRNA gene	Chr15:58109642-58121307 (+)
DBA/2J	MGP_DBA2J_G0005520	lincRNA gene	Chr15:51769782-51781537 (+)
FVB/NJ	MGP_FVBNJ_G0005546	lincRNA gene	Chr15:50890020-50901835 (+)
LP/J	MGP_LPJ_G0005604	lincRNA gene	Chr15:53806121-53824006 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005531	lincRNA gene	Chr15:63194467-63206835 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005725	lincRNA gene	Chr15:53690325-53703654 (+)
PWK/PhJ	MGP_PWKPhJ_G0005408	lincRNA gene	Chr15:51839134-51850679 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005326	lincRNA gene	Chr15:53433118-53449412 (+)
WSB/EiJ	MGP_WSBEiJ_G0005508	lincRNA gene	Chr15:53674466-53686861 (+)

Homology

• Gene Tree
  Gm26684
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  3
• Radiation induced
  1
• Genomic Mutations
  4 involving Gm26684
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  1

• Ensembl
  ENSMUSG00000097286 (Evidence)
• NCBI Gene
  102638507

Representative Sequences			Length	Strain/Species
genomic	102638507	NCBI Gene Model | MGI Sequence Detail	17758	C57BL/6J
transcript	NR_155354	RefSeq | MGI Sequence Detail	1136	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 15

  Diseases 1

  Phenotypes 11
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:155838 Katayama K, et al., Characterization of the chromosomal inversion associated with the Koa mutation in the mouse revealed the cause of skeletal abnormalities. BMC Genet. 2009;10:60

TSS for Gm26684:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr131286	Chr15:54816335-54816371 (+)	9 bp