Gm26822 Gene Detail

Summary

• Symbol
  Gm26822
• Name
  predicted gene, 26822

• Feature Type
  lncRNA gene
• IDs
  MGI:5477316
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr16:10645791-10651371 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  222 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477316	lncRNA gene	Chr16:10645791-10651371 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005636	lincRNA gene	Chr16:7658770-7664326 (+)
A/J	MGP_AJ_G0005623	lincRNA gene	Chr16:7239699-7245305 (+)
AKR/J	MGP_AKRJ_G0005602	lincRNA gene	Chr16:7562010-7569537 (+)
BALB/cJ	MGP_BALBcJ_G0005603	lincRNA gene	Chr16:7368430-7374013 (+)
C3H/HeJ	MGP_C3HHeJ_G0005550	lincRNA gene	Chr16:7646134-7651691 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005761	lincRNA gene	Chr16:7810107-7823385 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005125	lincRNA gene	Chr16:7382372-7388563 (+)
CAST/EiJ	MGP_CASTEiJ_G0005494	lincRNA gene	Chr16:7661633-7670103 (+)
CBA/J	MGP_CBAJ_G0005540	lincRNA gene	Chr16:8154061-8159633 (+)
DBA/2J	MGP_DBA2J_G0005555	lincRNA gene	Chr16:7241034-7246600 (+)
FVB/NJ	MGP_FVBNJ_G0005582	lincRNA gene	Chr16:7227358-7233572 (+)
LP/J	MGP_LPJ_G0005639	lincRNA gene	Chr16:7608400-7613963 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005567	lincRNA gene	Chr16:7864400-7870939 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005761	lincRNA gene	Chr16:7515700-7521251 (+)
PWK/PhJ	MGP_PWKPhJ_G0005442	lincRNA gene	Chr16:7452844-7458542 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005360	lincRNA gene	Chr16:7574491-7579912 (+)
WSB/EiJ	MGP_WSBEiJ_G0005544	lincRNA gene	Chr16:7592758-7598324 (+)

Homology

• Gene Tree
  Gm26822
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000096921 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096921	Ensembl Gene Model | MGI Sequence Detail	5581	C57BL/6J
transcript	ENSMUST00000181732	Ensembl | MGI Sequence Detail	3374	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26822:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr137057	Chr16:10645254-10645259 (+)	-534 bp
Tssr137058	Chr16:10645785-10645808 (+)	6 bp