Gm26838 Gene Detail

Summary

• Symbol
  Gm26838
• Name
  predicted gene, 26838

• Feature Type
  lncRNA gene
• IDs
  MGI:5477332
  NCBI Gene: 102638960
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:35626317-35629316 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  198 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477332	lncRNA gene	Chr16:35626317-35629316 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005659	lincRNA gene	Chr16:34146379-34149375 (-)
A/J	MGP_AJ_G0005646	lincRNA gene	Chr16:32488869-32491865 (-)
AKR/J	MGP_AKRJ_G0005625	lincRNA gene	Chr16:33625402-33628397 (-)
BALB/cJ	MGP_BALBcJ_G0005626	lincRNA gene	Chr16:32617865-32620861 (-)
C3H/HeJ	MGP_C3HHeJ_G0005573	lincRNA gene	Chr16:33759856-33762852 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0005784	lincRNA gene	Chr16:34884119-34887118 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005142	lincRNA gene	Chr16:32851897-32855136 (-)
CAST/EiJ	MGP_CASTEiJ_G0005517	lincRNA gene	Chr16:33982079-33985073 (-)
CBA/J	MGP_CBAJ_G0005563	lincRNA gene	Chr16:36287921-36290909 (-)
DBA/2J	MGP_DBA2J_G0005578	lincRNA gene	Chr16:32317324-32320357 (-)
FVB/NJ	MGP_FVBNJ_G0005605	lincRNA gene	Chr16:32315856-32318849 (-)
LP/J	MGP_LPJ_G0005662	lincRNA gene	Chr16:33880110-33883106 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005590	lincRNA gene	Chr16:35574993-35577989 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005784	lincRNA gene	Chr16:33689213-33692209 (-)
PWK/PhJ	MGP_PWKPhJ_G0005464	lincRNA gene	Chr16:32715870-32718866 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0005383	lincRNA gene	Chr16:33486147-33489134 (-)
WSB/EiJ	MGP_WSBEiJ_G0005567	lincRNA gene	Chr16:33610554-33613550 (-)

Homology

• Gene Tree
  Gm26838
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097914 (Evidence)
• NCBI Gene
  102638960

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097914	Ensembl Gene Model | MGI Sequence Detail	3000	C57BL/6J
transcript	ENSMUST00000180485	Ensembl | MGI Sequence Detail	911	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;