Gm26956 Pseudogene Detail

Summary

• Symbol
  Gm26956
• Name
  predicted gene, 26956

• Feature Type
  pseudogene
• IDs
  MGI:5504071
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:11954444-11955429 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  202 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504071	pseudogene	Chr13:11954444-11955429 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010968	pseudogene	Chr13:8653760-8654745 (+)
A/J	MGP_AJ_G0010972	pseudogene	Chr13:8508924-8509909 (+)
AKR/J	MGP_AKRJ_G0010925	pseudogene	Chr13:8709182-8710170 (+)
BALB/cJ	MGP_BALBcJ_G0010945	pseudogene	Chr13:8498713-8499698 (+)
C3H/HeJ	MGP_C3HHeJ_G0010845	pseudogene	Chr13:8834575-8835560 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011228	pseudogene	Chr13:9069812-9070797 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009821	pseudogene	Chr13:8345706-8346694 (+)
CAST/EiJ	MGP_CASTEiJ_G0010671	pseudogene	Chr13:8521760-8522748 (+)
CBA/J	MGP_CBAJ_G0010817	pseudogene	Chr13:9323708-9324693 (+)
DBA/2J	MGP_DBA2J_G0010864	pseudogene	Chr13:8337294-8338279 (+)
FVB/NJ	MGP_FVBNJ_G0010876	pseudogene	Chr13:8147450-8148435 (+)
LP/J	MGP_LPJ_G0010950	pseudogene	Chr13:8767183-8768171 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010861	pseudogene	Chr13:9643396-9644384 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011207	pseudogene	Chr13:8594503-8596024 (+)
PWK/PhJ	MGP_PWKPhJ_G0010555	pseudogene	Chr13:8366054-8367041 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010376	pseudogene	Chr13:8590031-8591019 (+)
WSB/EiJ	MGP_WSBEiJ_G0010719	pseudogene	Chr13:8542924-8543909 (+)

Homology

• Gene Tree
  Gm26956
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098110 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098110	Ensembl Gene Model | MGI Sequence Detail	986	C57BL/6J
transcript	ENSMUST00000182176	Ensembl | MGI Sequence Detail	986	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26956:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr118337	Chr13:11954369-11954377 (+)	-71 bp