Gm26970 Pseudogene Detail

Summary

• Symbol
  Gm26970
• Name
  predicted gene, 26970

• Feature Type
  pseudogene
• IDs
  MGI:5504085
  NCBI Gene: 102634729
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:142268861-142269824 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504085	pseudogene	Chr5:142268861-142269824 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013299	pseudogene	Chr5:147494536-147495499 (+)
A/J	MGP_AJ_G0013278	pseudogene	Chr5:141191712-141192675 (+)
AKR/J	MGP_AKRJ_G0013243	pseudogene	Chr5:145598019-145598982 (+)
BALB/cJ	MGP_BALBcJ_G0013257	pseudogene	Chr5:142437761-142438724 (+)
C3H/HeJ	MGP_C3HHeJ_G0013107	pseudogene	Chr5:146414287-146415250 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013626	pseudogene	Chr5:152907353-152908316 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011771	pseudogene	Chr5:135004040-135005001 (+)
CAST/EiJ	MGP_CASTEiJ_G0012827	pseudogene	Chr5:145853675-145854639 (+)
CBA/J	MGP_CBAJ_G0013075	pseudogene	Chr5:159128435-159129398 (+)
DBA/2J	MGP_DBA2J_G0013158	pseudogene	Chr5:140970608-140971571 (+)
FVB/NJ	MGP_FVBNJ_G0013157	pseudogene	Chr5:140152415-140153378 (+)
LP/J	MGP_LPJ_G0013226	pseudogene	Chr5:148122126-148123089 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013174	pseudogene	Chr5:161681308-161682271 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013628	pseudogene	Chr5:145445072-145446035 (+)
PWK/PhJ	MGP_PWKPhJ_G0012642	pseudogene	Chr5:140028323-140029286 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012432	pseudogene	Chr5:143168497-143169463 (+)
WSB/EiJ	MGP_WSBEiJ_G0012867	pseudogene	Chr5:146237898-146238860 (+)

Homology

• Gene Tree
  Gm26970
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000097947 (Evidence)
• NCBI Gene
  102634729

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097947	Ensembl Gene Model | MGI Sequence Detail	964	C57BL/6J
transcript	ENSMUST00000182990	Ensembl | MGI Sequence Detail	964	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;