Gm26989 Pseudogene Detail

Summary

• Symbol
  Gm26989
• Name
  predicted gene, 26989

• Feature Type
  pseudogene
• IDs
  MGI:5504104
  NCBI Gene: 100502916
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:137030856-137034401 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  240 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504104	pseudogene	Chr5:137028707-137034401 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040412	pseudogene	Chr5:141709343-141712920 (+)
A/J	MGP_AJ_G0040391	pseudogene	Chr5:135574905-135578480 (+)
AKR/J	MGP_AKRJ_G0040322	pseudogene	Chr5:139965405-139968943 (+)
BALB/cJ	MGP_BALBcJ_G0040398	pseudogene	Chr5:136933948-136937525 (+)
C3H/HeJ	MGP_C3HHeJ_G0040020	pseudogene	Chr5:140587212-140590789 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041011	pseudogene	Chr5:146985928-146989473 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039986	pseudogene	Chr5:152721890-152725467 (+)
DBA/2J	MGP_DBA2J_G0040192	pseudogene	Chr5:135471623-135475198 (+)
FVB/NJ	MGP_FVBNJ_G0040140	pseudogene	Chr5:134647232-134650809 (+)
LP/J	MGP_LPJ_G0040232	pseudogene	Chr5:142146889-142150579 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040133	pseudogene	Chr5:155622778-155626355 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041088	pseudogene	Chr5:139794082-139797659 (+)
PWK/PhJ	MGP_PWKPhJ_G0038769	pseudogene	Chr5:134559495-134563683 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038478	pseudogene	Chr5:137383635-137387328 (+)
WSB/EiJ	MGP_WSBEiJ_G0039327	pseudogene	Chr5:140538656-140542526 (+)

Homology

• Gene Tree
  Gm26989
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000098131 (Evidence)
• NCBI Gene
  100502916

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098131	Ensembl Gene Model | MGI Sequence Detail	3546	C57BL/6J
transcript	ENSMUST00000182608	Ensembl | MGI Sequence Detail	749	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;