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Gm27003 Gene Detail
Summary
  • Symbol
    Gm27003
  • Name
    predicted gene, 27003
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5504118
    NCBI Gene: 105244282
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:126517824-126525725 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    229 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5504118
 lncRNA gene Chr2:126517824-126525725 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003630
 antisense lncRNA gene Chr2:129902553-129911279 (+)
A/J MGP_AJ_G0003612
 antisense lncRNA gene Chr2:124639880-124648095 (+)
AKR/J MGP_AKRJ_G0003590
 antisense lncRNA gene Chr2:128209318-128218200 (+)
BALB/cJ MGP_BALBcJ_G0003601
 antisense lncRNA gene Chr2:124907107-124915136 (+)
C3H/HeJ MGP_C3HHeJ_G0003548
 antisense lncRNA gene Chr2:128701775-128709727 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003740
 antisense lncRNA gene Chr2:134032694-134040623 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003248
 antisense lncRNA gene Chr2:119364934-119372744 (+)
CAST/EiJ MGP_CASTEiJ_G0003511
 antisense lncRNA gene Chr2:128919592-128927300 (+)
CBA/J MGP_CBAJ_G0003545
 antisense lncRNA gene Chr2:138941098-138951772 (+)
DBA/2J MGP_DBA2J_G0003553
 antisense lncRNA gene Chr2:124051354-124059917 (+)
FVB/NJ MGP_FVBNJ_G0003573
 antisense lncRNA gene Chr2:122709431-122717182 (+)
LP/J MGP_LPJ_G0003630
 antisense lncRNA gene Chr2:130162244-130170016 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003561
 antisense lncRNA gene Chr2:143016570-143026451 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003741
 antisense lncRNA gene Chr2:128231650-128239613 (+)
PWK/PhJ MGP_PWKPhJ_G0003466
 antisense lncRNA gene Chr2:123592210-123601007 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003409
 antisense lncRNA gene Chr2:127312890-127320580 (+)
WSB/EiJ MGP_WSBEiJ_G0003545
 antisense lncRNA gene Chr2:129116129-129123802 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    30
  • Chemically induced (other)
    1
  • Gene trapped
    28
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm27003
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000098024 Ensembl Gene Model | MGI Sequence Detail 7902 C57BL/6J ±  kb
transcript ENSMUST00000247624 Ensembl | MGI Sequence Detail 547 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory