Gm27005 Pseudogene Detail

Summary

• Symbol
  Gm27005
• Name
  predicted gene, 27005

• Feature Type
  pseudogene
• IDs
  MGI:5504120
  NCBI Gene: 102637339
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:25545446-25546366 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504120	pseudogene	Chr16:25545446-25546366 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011264	pseudogene	Chr16:23434319-23435239 (+)
A/J	MGP_AJ_G0011248	pseudogene	Chr16:22325856-22326776 (+)
AKR/J	MGP_AKRJ_G0011210	pseudogene	Chr16:23247157-23248077 (+)
BALB/cJ	MGP_BALBcJ_G0011219	pseudogene	Chr16:22526874-22527794 (+)
C3H/HeJ	MGP_C3HHeJ_G0011115	pseudogene	Chr16:23342827-23343747 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011510	pseudogene	Chr16:23976998-23977918 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010098	pseudogene	Chr16:22921094-22922383 (+)
CAST/EiJ	MGP_CASTEiJ_G0010941	pseudogene	Chr16:23397015-23397935 (+)
CBA/J	MGP_CBAJ_G0011095	pseudogene	Chr16:24959981-24960901 (+)
DBA/2J	MGP_DBA2J_G0011142	pseudogene	Chr16:22268927-22269847 (+)
FVB/NJ	MGP_FVBNJ_G0011146	pseudogene	Chr16:22262011-22262931 (+)
LP/J	MGP_LPJ_G0011239	pseudogene	Chr16:23211682-23212602 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011140	pseudogene	Chr16:24400168-24401088 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011493	pseudogene	Chr16:23192098-23193018 (+)
PWK/PhJ	MGP_PWKPhJ_G0010814	pseudogene	Chr16:22559334-22560254 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010639	pseudogene	Chr16:22977124-22978044 (+)
WSB/EiJ	MGP_WSBEiJ_G0010986	pseudogene	Chr16:23152253-23153173 (+)

Homology

• Gene Tree
  Gm27005
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098103 (Evidence)
• NCBI Gene
  102637339

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098103	Ensembl Gene Model | MGI Sequence Detail	921	C57BL/6J
transcript	ENSMUST00000182783	Ensembl | MGI Sequence Detail	921	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;