Gm27033 Gene Detail

Summary

• Symbol
  Gm27033
• Name
  predicted gene, 27033

• Feature Type
  lncRNA gene
• IDs
  MGI:5504148
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:147217530-147218073 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504148	lncRNA gene	Chr5:147217530-147218073 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006858	lincRNA gene	Chr5:152923972-152924515 (+)
A/J	MGP_AJ_G0006852	lincRNA gene	Chr5:146448992-146449535 (+)
AKR/J	MGP_AKRJ_G0006822	lincRNA gene	Chr5:150952453-150952996 (+)
BALB/cJ	MGP_BALBcJ_G0006828	lincRNA gene	Chr5:147661652-147662195 (+)
C3H/HeJ	MGP_C3HHeJ_G0006773	lincRNA gene	Chr5:151914998-151915541 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006993	lincRNA gene	Chr5:158525940-158526483 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006244	lincRNA gene	Chr5:140865445-140866165 (+)
CAST/EiJ	MGP_CASTEiJ_G0006692	lincRNA gene	Chr5:151470785-151471334 (+)
CBA/J	MGP_CBAJ_G0006755	lincRNA gene	Chr5:165132185-165132728 (+)
DBA/2J	MGP_DBA2J_G0006775	lincRNA gene	Chr5:146132965-146133508 (+)
FVB/NJ	MGP_FVBNJ_G0006798	lincRNA gene	Chr5:145329059-145329602 (+)
LP/J	MGP_LPJ_G0006858	lincRNA gene	Chr5:153626051-153626594 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006780	lincRNA gene	Chr5:167414389-167414932 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006995	lincRNA gene	Chr5:150853888-150854434 (+)
PWK/PhJ	MGP_PWKPhJ_G0006634	lincRNA gene	Chr5:145215842-145216386 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0006541	lincRNA gene	Chr5:148178204-148178739 (+)
WSB/EiJ	MGP_WSBEiJ_G0006746	lincRNA gene	Chr5:151658578-151659121 (+)

Homology

• Gene Tree
  Gm27033
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098053 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098053	Ensembl Gene Model | MGI Sequence Detail	544	C57BL/6J
transcript	ENSMUST00000183226	Ensembl | MGI Sequence Detail	544	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;