Gm27043 Pseudogene Detail

Summary

• Symbol
  Gm27043
• Name
  predicted gene, 27043

• Feature Type
  pseudogene
• IDs
  MGI:5504158
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:17225506-17226463 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504158	pseudogene	Chr13:17225506-17226463 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010970	pseudogene	Chr13:14088167-14089124 (+)
A/J	MGP_AJ_G0010974	pseudogene	Chr13:13913877-13914834 (+)
AKR/J	MGP_AKRJ_G0010926	pseudogene	Chr13:14152476-14153433 (+)
BALB/cJ	MGP_BALBcJ_G0010947	pseudogene	Chr13:13870361-13871318 (+)
C3H/HeJ	MGP_C3HHeJ_G0010847	pseudogene	Chr13:14202423-14203380 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011230	pseudogene	Chr13:14806623-14807580 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009823	pseudogene	Chr13:12503967-12504925 (+)
CAST/EiJ	MGP_CASTEiJ_G0010673	pseudogene	Chr13:13919712-13920669 (+)
CBA/J	MGP_CBAJ_G0010819	pseudogene	Chr13:15240295-15241252 (+)
DBA/2J	MGP_DBA2J_G0010866	pseudogene	Chr13:13560993-13561950 (+)
FVB/NJ	MGP_FVBNJ_G0010878	pseudogene	Chr13:13267202-13268159 (+)
LP/J	MGP_LPJ_G0010952	pseudogene	Chr13:14338377-14339334 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010863	pseudogene	Chr13:15580228-15581185 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011209	pseudogene	Chr13:13944798-13945755 (+)
PWK/PhJ	MGP_PWKPhJ_G0010557	pseudogene	Chr13:13619135-13620092 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010377	pseudogene	Chr13:13073972-13074935 (+)
WSB/EiJ	MGP_WSBEiJ_G0010720	pseudogene	Chr13:13950596-13951553 (+)

Homology

• Gene Tree
  Gm27043
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098218 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098218	Ensembl Gene Model | MGI Sequence Detail	958	C57BL/6J
transcript	ENSMUST00000182807	Ensembl | MGI Sequence Detail	958	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;