Mir6359 Gene Detail

Summary

• Symbol
  Mir6359
• Name
  microRNA 6359
• Synonyms
  mmu-mir-6359

• Feature Type
  miRNA gene
• IDs
  MGI:5530710
  NCBI Gene: 102466633
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:88990154-88990234 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530710	miRNA gene	Chr18:88990154-88990234 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008408	miRNA gene	Chr18:90315552-90315632 (+)
A/J	MGP_AJ_G0008397	miRNA gene	Chr18:86285554-86285634 (+)
AKR/J	MGP_AKRJ_G0008381	miRNA gene	Chr18:88886992-88887072 (+)
BALB/cJ	MGP_BALBcJ_G0008382	miRNA gene	Chr18:86560763-86560843 (+)
C3H/HeJ	MGP_C3HHeJ_G0008327	miRNA gene	Chr18:89029388-89029468 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008583	miRNA gene	Chr18:92619170-92619250 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007612	miRNA gene	Chr18:85029886-85029966 (+)
CAST/EiJ	MGP_CASTEiJ_G0008187	miRNA gene	Chr18:89498477-89498557 (+)
CBA/J	MGP_CBAJ_G0008293	miRNA gene	Chr18:95915009-95915089 (+)
DBA/2J	MGP_DBA2J_G0008325	miRNA gene	Chr18:85842243-85842323 (+)
FVB/NJ	MGP_FVBNJ_G0008347	miRNA gene	Chr18:85164768-85164848 (+)
LP/J	MGP_LPJ_G0008410	miRNA gene	Chr18:90187499-90187579 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008313	miRNA gene	Chr18:97744672-97744752 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008572	miRNA gene	Chr18:89174640-89174720 (+)
PWK/PhJ	MGP_PWKPhJ_G0008110	miRNA gene	Chr18:86202652-86202732 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007987	miRNA gene	Chr18:89152359-89152439 (+)
WSB/EiJ	MGP_WSBEiJ_G0008270	miRNA gene	Chr18:89080033-89080113 (+)

Homology

• Gene Tree
  Mir6359
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Mir6359
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098676 (Evidence)
• NCBI Gene
  102466633

Representative Sequences			Length	Strain/Species
genomic	102466633	NCBI Gene Model | MGI Sequence Detail	81	C57BL/6J
transcript	NR_105777	RefSeq | MGI Sequence Detail	81	ZRU/MplStud

Other Database
Links

miRBase

MI0021887

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:45709 Melloy PG, et al., No turning, a mouse mutation causing left-right and axial patterning defects. Dev Biol. 1998 Jan 1;193(1):77-89
• Latest
  J:132045 Chatterjee B, et al., Nt mutation causing laterality defects associated with deletion of rotatin. Mamm Genome. 2007 May;18(5):310-5

TSS for Mir6359:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr152266	Chr18:88990126-88990164 (+)	-9 bp