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Mir6417 Gene Detail
Summary
  • Symbol
    Mir6417
  • Name
    microRNA 6417
  • Synonyms
    mmu-mir-6417
Location &
Maps
more
  • Sequence Map
    Chr5:52293244-52293359 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    149 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5530716
 miRNA gene Chr5:52293244-52293359 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008814
 miRNA gene Chr5:51093296-51093411 (-)
A/J MGP_AJ_G0008799
 miRNA gene Chr5:49307659-49307774 (-)
AKR/J MGP_AKRJ_G0008791
 miRNA gene Chr5:50975327-50975442 (-)
BALB/cJ MGP_BALBcJ_G0008787
 miRNA gene Chr5:49774809-49774924 (-)
C3H/HeJ MGP_C3HHeJ_G0008728
 miRNA gene Chr5:51148736-51148851 (-)
C57BL/6NJ MGP_C57BL6NJ_G0009014
 miRNA gene Chr5:53231507-53231622 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007947
 miRNA gene Chr5:46088536-46088651 (-)
CAST/EiJ MGP_CASTEiJ_G0008569
 miRNA gene Chr5:50141547-50141662 (-)
CBA/J MGP_CBAJ_G0008694
 miRNA gene Chr5:54862562-54862677 (-)
DBA/2J MGP_DBA2J_G0008725
 miRNA gene Chr5:49368550-49368665 (-)
FVB/NJ MGP_FVBNJ_G0008745
 miRNA gene Chr5:48708964-48709079 (-)
LP/J MGP_LPJ_G0008818
 miRNA gene Chr5:51558385-51558500 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008709
 miRNA gene Chr5:55973081-55973196 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008994
 miRNA gene Chr5:50474542-50474657 (-)
PWK/PhJ MGP_PWKPhJ_G0008499
 miRNA gene Chr5:48429101-48429216 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008347
 miRNA gene Chr5:49908834-49908949 (-)
WSB/EiJ MGP_WSBEiJ_G0008667
 miRNA gene Chr5:50516093-50516208 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Mir6417
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102466648 NCBI Gene Model | MGI Sequence Detail 116 C57BL/6J ±  kb
transcript NR_105845 RefSeq | MGI Sequence Detail 116 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0021955
References
more
  • Summaries
    All 21
    Phenotypes 17
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory