Mir6377 Gene Detail

Summary

• Symbol
  Mir6377
• Name
  microRNA 6377
• Synonyms
  mmu-mir-6377

• Feature Type
  miRNA gene
• IDs
  MGI:5530798
  NCBI Gene: 102465197
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:57524030-57524143 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530798	miRNA gene	Chr3:57524030-57524143 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008645	miRNA gene	Chr3:56413934-56414047 (+)
A/J	MGP_AJ_G0008635	miRNA gene	Chr3:54665226-54665339 (+)
AKR/J	MGP_AKRJ_G0008624	miRNA gene	Chr3:55797971-55798084 (+)
BALB/cJ	MGP_BALBcJ_G0008622	miRNA gene	Chr3:54492215-54492328 (+)
C3H/HeJ	MGP_C3HHeJ_G0008564	miRNA gene	Chr3:55985703-55985816 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008836	miRNA gene	Chr3:58502028-58502141 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0008416	miRNA gene	Chr3:56152100-56152212 (+)
CBA/J	MGP_CBAJ_G0008528	miRNA gene	Chr3:60435304-60435417 (+)
DBA/2J	MGP_DBA2J_G0008562	miRNA gene	Chr3:54164101-54164214 (+)
FVB/NJ	MGP_FVBNJ_G0008583	miRNA gene	Chr3:53139382-53139494 (+)
LP/J	MGP_LPJ_G0008653	miRNA gene	Chr3:57156836-57156949 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008547	miRNA gene	Chr3:64526125-64526238 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008818	miRNA gene	Chr3:55730680-55730793 (+)
PWK/PhJ	MGP_PWKPhJ_G0008341	miRNA gene	Chr3:53815112-53815224 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008196	miRNA gene	Chr3:55419288-55419400 (+)
WSB/EiJ	MGP_WSBEiJ_G0008501	miRNA gene	Chr3:55819665-55819777 (+)

Homology

• Gene Tree
  Mir6377
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Mir6377
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000098401 (Evidence)
• NCBI Gene
  102465197

Representative Sequences			Length	Strain/Species
genomic	102465197	NCBI Gene Model | MGI Sequence Detail	114	C57BL/6J
transcript	NR_105797	RefSeq | MGI Sequence Detail	114	ZRU/MplStud

Other Database
Links

miRBase

MI0021907

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426