Mir8094 Gene Detail

Summary

• Symbol
  Mir8094
• Name
  microRNA 8094
• Synonyms
  mmu-mir-8094

• Feature Type
  miRNA gene
• IDs
  MGI:5530895
  NCBI Gene: 102465886
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr17:35470265-35470381 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530895	miRNA gene	Chr17:35470265-35470381 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008342	miRNA gene	Chr17:35404418-35404534 (+)
A/J	MGP_AJ_G0008328	miRNA gene	Chr17:34221426-34221542 (+)
AKR/J	MGP_AKRJ_G0008312	miRNA gene	Chr17:34701581-34701697 (+)
BALB/cJ	MGP_BALBcJ_G0008313	miRNA gene	Chr17:34370210-34370326 (+)
C3H/HeJ	MGP_C3HHeJ_G0008255	miRNA gene	Chr17:35106960-35107076 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008510	miRNA gene	Chr17:36759982-36760098 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0008123	miRNA gene	Chr17:35119180-35119296 (+)
CBA/J	MGP_CBAJ_G0008225	miRNA gene	Chr17:38260144-38260260 (+)
DBA/2J	MGP_DBA2J_G0008256	miRNA gene	Chr17:33550271-33550387 (+)
FVB/NJ	MGP_FVBNJ_G0008281	miRNA gene	Chr17:33393188-33393304 (+)
LP/J	MGP_LPJ_G0008341	miRNA gene	Chr17:35733086-35733202 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008244	miRNA gene	Chr17:37187533-37187649 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008500	miRNA gene	Chr17:34931900-34932016 (+)
PWK/PhJ	MGP_PWKPhJ_G0008043	miRNA gene	Chr17:32390045-32390161 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007930	miRNA gene	Chr17:32940669-32940785 (+)
WSB/EiJ	MGP_WSBEiJ_G0008202	miRNA gene	Chr17:35062175-35062291 (+)

Homology

• Gene Tree
  Mir8094
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Mir8094
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000098269 (Evidence)
• NCBI Gene
  102465886

Representative Sequences			Length	Strain/Species
genomic	102465886	NCBI Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	NR_106169	RefSeq | MGI Sequence Detail	117	ZRU/MplStud

Other Database
Links

miRBase

MI0026021

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:190754 Ermakova O, et al., Construction and phenotypic analysis of mice carrying a duplication of the major histocompatibility class I (MHC-I) locus. Mamm Genome. 2012 Aug;23(7-8):443-53

TSS for Mir8094:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr144332	Chr17:35470190-35470213 (+)	-63 bp