Mir8100 Gene Detail

Summary

• Symbol
  Mir8100
• Name
  microRNA 8100
• Synonyms
  mmu-mir-8100

• Feature Type
  miRNA gene
• IDs
  MGI:5531020
  NCBI Gene: 102465996
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:45993097-45993217 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531020	miRNA gene	Chr11:45993097-45993217 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007798	miRNA gene	Chr11:45002429-45002549 (+)
A/J	MGP_AJ_G0007794	miRNA gene	Chr11:43275944-43276064 (+)
AKR/J	MGP_AKRJ_G0007768	miRNA gene	Chr11:44513617-44513737 (+)
BALB/cJ	MGP_BALBcJ_G0007771	miRNA gene	Chr11:43432223-43432343 (+)
C3H/HeJ	MGP_C3HHeJ_G0007718	miRNA gene	Chr11:44560497-44560617 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007949	miRNA gene	Chr11:46340412-46340532 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007094	miRNA gene	Chr11:41256635-41256755 (+)
CAST/EiJ	MGP_CASTEiJ_G0007611	miRNA gene	Chr11:44683215-44683335 (+)
CBA/J	MGP_CBAJ_G0007690	miRNA gene	Chr11:48513928-48514048 (+)
DBA/2J	MGP_DBA2J_G0007725	miRNA gene	Chr11:43020844-43020964 (+)
FVB/NJ	MGP_FVBNJ_G0007742	miRNA gene	Chr11:42698141-42698261 (+)
LP/J	MGP_LPJ_G0007802	miRNA gene	Chr11:45247374-45247494 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007712	miRNA gene	Chr11:50042721-50042841 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007947	miRNA gene	Chr11:44681110-44681230 (+)
PWK/PhJ	MGP_PWKPhJ_G0007541	miRNA gene	Chr11:43099249-43099369 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007437	miRNA gene	Chr11:44475285-44475406 (+)
WSB/EiJ	MGP_WSBEiJ_G0007679	miRNA gene	Chr11:44381693-44381813 (+)

Homology

• Gene Tree
  Mir8100
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir8100
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098942 (Evidence)
• NCBI Gene
  102465996

Representative Sequences			Length	Strain/Species
genomic	102465996	NCBI Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	NR_106177	RefSeq | MGI Sequence Detail	121	ZRU/MplStud

Other Database
Links

miRBase

MI0026029

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4