Mir7008 Gene Detail

Summary

• Symbol
  Mir7008
• Name
  microRNA 7008
• Synonyms
  mmu-mir-7008

• Feature Type
  miRNA gene
• IDs
  MGI:5531134
  NCBI Gene: 102465610
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:31093115-31093177 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531134	miRNA gene	Chr3:31093115-31093177 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008635	miRNA gene	Chr3:28553960-28554022 (+)
A/J	MGP_AJ_G0008625	miRNA gene	Chr3:28180654-28180716 (+)
AKR/J	MGP_AKRJ_G0008614	miRNA gene	Chr3:28614326-28614388 (+)
BALB/cJ	MGP_BALBcJ_G0008612	miRNA gene	Chr3:27869019-27869081 (+)
C3H/HeJ	MGP_C3HHeJ_G0008554	miRNA gene	Chr3:28625167-28625229 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008826	miRNA gene	Chr3:30064632-30064694 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007796	miRNA gene	Chr3:26087806-26087868 (+)
CAST/EiJ	MGP_CASTEiJ_G0008407	miRNA gene	Chr3:28551201-28551263 (+)
CBA/J	MGP_CBAJ_G0008518	miRNA gene	Chr3:30826758-30826820 (+)
DBA/2J	MGP_DBA2J_G0008552	miRNA gene	Chr3:27729295-27729357 (+)
FVB/NJ	MGP_FVBNJ_G0008573	miRNA gene	Chr3:27174693-27174755 (+)
LP/J	MGP_LPJ_G0008642	miRNA gene	Chr3:29250188-29250250 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008536	miRNA gene	Chr3:33405721-33405783 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008807	miRNA gene	Chr3:28386580-28386642 (+)
PWK/PhJ	MGP_PWKPhJ_G0008332	miRNA gene	Chr3:27248675-27248737 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008188	miRNA gene	Chr3:27884964-27885026 (+)
WSB/EiJ	MGP_WSBEiJ_G0008492	miRNA gene	Chr3:28451620-28451682 (+)

Homology

• Gene Tree
  Mir7008
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Mir7008
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098890 (Evidence)
• NCBI Gene
  102465610

Representative Sequences			Length	Strain/Species
genomic	102465610	NCBI Gene Model | MGI Sequence Detail	63	C57BL/6J
transcript	NR_105975	RefSeq | MGI Sequence Detail	63	ZRU/MplStud

Other Database
Links

miRBase

MI0022857

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Mir7008:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr28703	Chr3:31093099-31093115 (+)	-8 bp