Mir6943 Gene Detail

Summary

• Symbol
  Mir6943
• Name
  microRNA 6943
• Synonyms
  mmu-mir-6943

• Feature Type
  miRNA gene
• IDs
  MGI:5531173
  NCBI Gene: 102466770
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:55600919-55600984 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531173	miRNA gene	Chr13:55600919-55600984 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008069	miRNA gene	Chr13:54938261-54938326 (+)
A/J	MGP_AJ_G0008058	miRNA gene	Chr13:52904792-52904857 (+)
AKR/J	MGP_AKRJ_G0008036	miRNA gene	Chr13:54470333-54470398 (+)
BALB/cJ	MGP_BALBcJ_G0008039	miRNA gene	Chr13:53138282-53138347 (+)
C3H/HeJ	MGP_C3HHeJ_G0007983	miRNA gene	Chr13:54280717-54280782 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008223	miRNA gene	Chr13:56597278-56597343 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007332	miRNA gene	Chr13:50846368-50846433 (+)
CAST/EiJ	MGP_CASTEiJ_G0007869	miRNA gene	Chr13:54381225-54381290 (+)
CBA/J	MGP_CBAJ_G0007953	miRNA gene	Chr13:58764034-58764099 (+)
DBA/2J	MGP_DBA2J_G0007987	miRNA gene	Chr13:52458983-52459048 (+)
FVB/NJ	MGP_FVBNJ_G0008008	miRNA gene	Chr13:51925147-51925212 (+)
LP/J	MGP_LPJ_G0008069	miRNA gene	Chr13:55194335-55194400 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007980	miRNA gene	Chr13:58239559-58239624 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008223	miRNA gene	Chr13:54051792-54051857 (+)
PWK/PhJ	MGP_PWKPhJ_G0007786	miRNA gene	Chr13:52482474-52482539 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007683	miRNA gene	Chr13:52976975-52977040 (+)
WSB/EiJ	MGP_WSBEiJ_G0007938	miRNA gene	Chr13:54408962-54409027 (+)

Homology

• Gene Tree
  Mir6943
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Targeted
  1
• Genomic Mutations
  2 involving Mir6943
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000099058 (Evidence)
• NCBI Gene
  102466770

Representative Sequences			Length	Strain/Species
genomic	102466770	NCBI Gene Model | MGI Sequence Detail	66	C57BL/6J
transcript	NR_105908	RefSeq | MGI Sequence Detail	66	ZRU/MplStud

Other Database
Links

miRBase

MI0022790

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:190741 Migdalska AM, et al., Generation of the Sotos syndrome deletion in mice. Mamm Genome. 2012 Dec;23(11-12):749-57