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Mir6339 Gene Detail
Summary
  • Symbol
    Mir6339
  • Name
    microRNA 6339
  • Synonyms
    mmu-mir-6339
Location &
Maps
more
  • Sequence Map
    Chr2:129858212-129858328 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    125 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5531230
 miRNA gene Chr2:129858212-129858328 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008590
 miRNA gene Chr2:133433015-133433131 (-)
A/J MGP_AJ_G0008577
 miRNA gene Chr2:128053373-128053489 (-)
AKR/J MGP_AKRJ_G0008564
 miRNA gene Chr2:131712198-131712314 (-)
BALB/cJ MGP_BALBcJ_G0008565
 miRNA gene Chr2:128399647-128399763 (-)
C3H/HeJ MGP_C3HHeJ_G0008505
 miRNA gene Chr2:132176546-132176662 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008775
 miRNA gene Chr2:137583464-137583580 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007755
 miRNA gene Chr2:122802159-122802275 (-)
CAST/EiJ MGP_CASTEiJ_G0008363
 miRNA gene Chr2:132419164-132419280 (-)
CBA/J MGP_CBAJ_G0008471
 miRNA gene Chr2:142680625-142680741 (-)
DBA/2J MGP_DBA2J_G0008506
 miRNA gene Chr2:127445761-127445877 (-)
FVB/NJ MGP_FVBNJ_G0008526
 miRNA gene Chr2:126063970-126064086 (-)
LP/J MGP_LPJ_G0008597
 miRNA gene Chr2:133696921-133697037 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008487
 miRNA gene Chr2:146542953-146543069 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008761
 miRNA gene Chr2:131692728-131692844 (-)
PWK/PhJ MGP_PWKPhJ_G0008286
 miRNA gene Chr2:126992847-126992963 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008143
 miRNA gene Chr2:130811808-130811924 (-)
WSB/EiJ MGP_WSBEiJ_G0008446
 miRNA gene Chr2:132621016-132621132 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Mir6339
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102466628 NCBI Gene Model | MGI Sequence Detail 117 C57BL/6J ±  kb
transcript NR_105757 RefSeq | MGI Sequence Detail 117 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0021867
References
more
  • Summaries
    All 7
    Phenotypes 3
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory