Mir7017 Gene Detail

Summary

• Symbol
  Mir7017
• Name
  microRNA 7017
• Synonyms
  mmu-mir-7017

• Feature Type
  miRNA gene
• IDs
  MGI:5531327
  NCBI Gene: 102466215
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr4:132922966-132923027 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531327	miRNA gene	Chr4:132922966-132923027 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008763	miRNA gene	Chr4:135427503-135427564 (+)
A/J	MGP_AJ_G0008747	miRNA gene	Chr4:129764975-129765036 (+)
AKR/J	MGP_AKRJ_G0008739	miRNA gene	Chr4:133444980-133445041 (+)
BALB/cJ	MGP_BALBcJ_G0008738	miRNA gene	Chr4:130384869-130384930 (+)
C3H/HeJ	MGP_C3HHeJ_G0008678	miRNA gene	Chr4:133694027-133694088 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008956	miRNA gene	Chr4:140301074-140301135 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007903	miRNA gene	Chr4:122842218-122842278 (+)
CAST/EiJ	MGP_CASTEiJ_G0008519	miRNA gene	Chr4:131806404-131806465 (+)
CBA/J	MGP_CBAJ_G0008644	miRNA gene	Chr4:143955476-143955537 (+)
DBA/2J	MGP_DBA2J_G0008674	miRNA gene	Chr4:130184265-130184326 (+)
FVB/NJ	MGP_FVBNJ_G0008695	miRNA gene	Chr4:129057437-129057498 (+)
LP/J	MGP_LPJ_G0008768	miRNA gene	Chr4:135555967-135556028 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008660	miRNA gene	Chr4:148480737-148480798 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008938	miRNA gene	Chr4:133866553-133866614 (+)
PWK/PhJ	MGP_PWKPhJ_G0008448	miRNA gene	Chr4:126890414-126890475 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0008300	miRNA gene	Chr4:129706435-129706496 (+)
WSB/EiJ	MGP_WSBEiJ_G0008617	miRNA gene	Chr4:134032275-134032336 (+)

Homology

• Gene Tree
  Mir7017
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Mir7017
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000099202 (Evidence)
• NCBI Gene
  102466215

Representative Sequences			Length	Strain/Species
genomic	102466215	NCBI Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	NR_105984	RefSeq | MGI Sequence Detail	62	ZRU/MplStud

Other Database
Links

miRBase

MI0022866

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4

TSS for Mir7017:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr39467	Chr4:132921811-132921851 (+)	-1,135 bp