Gm28382 Gene Detail

Summary

• Symbol
  Gm28382
• Name
  predicted gene 28382

• Feature Type
  lncRNA gene
• IDs
  MGI:5579088
  NCBI Gene: 102639373
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:91410746-91412496 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  192 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579088	lncRNA gene	Chr1:91406493-91412497 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004914	lincRNA gene	Chr1:93018317-93020067 (+)
A/J	MGP_AJ_G0004896	lincRNA gene	Chr1:89673877-89675627 (+)
AKR/J	MGP_AKRJ_G0004874	lincRNA gene	Chr1:92333206-92334956 (+)
BALB/cJ	MGP_BALBcJ_G0004877	lincRNA gene	Chr1:89859541-89861291 (+)
C3H/HeJ	MGP_C3HHeJ_G0004826	lincRNA gene	Chr1:92553279-92555029 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005027	lincRNA gene	Chr1:96582532-96584282 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004451	lincRNA gene	Chr1:83929000-83930758 (+)
CAST/EiJ	MGP_CASTEiJ_G0004776	lincRNA gene	Chr1:91902562-91904334 (+)
CBA/J	MGP_CBAJ_G0004818	lincRNA gene	Chr1:99680683-99682433 (+)
DBA/2J	MGP_DBA2J_G0004837	lincRNA gene	Chr1:88900851-88902601 (+)
FVB/NJ	MGP_FVBNJ_G0004856	lincRNA gene	Chr1:87935579-87937329 (+)
LP/J	MGP_LPJ_G0004915	lincRNA gene	Chr1:94193489-94195239 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004842	lincRNA gene	Chr1:102917116-102918866 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005032	lincRNA gene	Chr1:92356626-92358376 (+)
PWK/PhJ	MGP_PWKPhJ_G0004729	lincRNA gene	Chr1:88314709-88316461 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004655	lincRNA gene	Chr1:91284129-91286014 (+)
WSB/EiJ	MGP_WSBEiJ_G0004822	lincRNA gene	Chr1:92160572-92162322 (+)

Homology

• Gene Tree
  Gm28382
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm28382
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  3

• Ensembl
  ENSMUSG00000100151 (Evidence)
• NCBI Gene
  102639373

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100151	Ensembl Gene Model | MGI Sequence Detail	1751	C57BL/6J
transcript	ENSMUST00000187902	Ensembl | MGI Sequence Detail	1669	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:345098 Yang S, et al., LncRNA Gm28382 promotes lipogenesis by interacting with miR-326-3p to regulate ChREBP signaling pathway in NAFLD. Int Immunopharmacol. 2023 Dec 28;127:111444

TSS for Gm28382:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8089	Chr1:91410739-91410752 (+)	0 bp