Gm29183 Gene Detail

Summary

• Symbol
  Gm29183
• Name
  predicted gene 29183

• Feature Type
  lncRNA gene
• IDs
  MGI:5579889
  NCBI Gene: 102633781
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:73789384-73866240 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  2086 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579889	lncRNA gene	Chr1:73789384-73881076 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004876	lincRNA gene	Chr1:74311320-74414750 (-)
A/J	MGP_AJ_G0004857	lincRNA gene	Chr1:71708745-71807962 (-)
AKR/J	MGP_AKRJ_G0004835	lincRNA gene	Chr1:73688798-73788155 (-)
BALB/cJ	MGP_BALBcJ_G0004838	lincRNA gene	Chr1:71773875-71870541 (-)
C3H/HeJ	MGP_C3HHeJ_G0004787	lincRNA gene	Chr1:74032011-74133142 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004989	lincRNA gene	Chr1:77206525-77312432 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004416	lincRNA gene	Chr1:67300188-67397448 (-)
CAST/EiJ	MGP_CASTEiJ_G0004740	lincRNA gene	Chr1:73349903-73449856 (-)
CBA/J	MGP_CBAJ_G0004780	lincRNA gene	Chr1:79722019-79821600 (-)
DBA/2J	MGP_DBA2J_G0004798	lincRNA gene	Chr1:71046250-71141814 (-)
FVB/NJ	MGP_FVBNJ_G0004818	lincRNA gene	Chr1:70221964-70316032 (-)
LP/J	MGP_LPJ_G0004877	lincRNA gene	Chr1:75395449-75499390 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004802	lincRNA gene	Chr1:83135723-83236882 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004993	lincRNA gene	Chr1:73752100-73855255 (-)
PWK/PhJ	MGP_PWKPhJ_G0004693	lincRNA gene	Chr1:70489237-70588776 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004619	lincRNA gene	Chr1:73105268-73209033 (-)
WSB/EiJ	MGP_WSBEiJ_G0004785	lincRNA gene	Chr1:73563374-73661855 (-)

Homology

• Gene Tree
  Gm29183
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm29183
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  6

• Ensembl
  ENSMUSG00000101344 (Evidence)
• NCBI Gene
  102633781

Representative Sequences			Length	Strain/Species
genomic	102633781	NCBI Gene Model | MGI Sequence Detail	76857	C57BL/6J
transcript	XR_004936175	RefSeq | MGI Sequence Detail	3464	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Gm29183:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr12211	Chr1:73791031-73791033 (-)	75,208 bp