Gm29214 Pseudogene Detail

Summary

• Symbol
  Gm29214
• Name
  predicted gene 29214

• Feature Type
  pseudogene
• IDs
  MGI:5579920
  NCBI Gene: 102632997
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:25654027-25654596 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579920	pseudogene	Chr1:25654027-25654596 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010040	pseudogene	Chr1:23501021-23501590 (-)
A/J	MGP_AJ_G0010022	pseudogene	Chr1:23016697-23017266 (-)
AKR/J	MGP_AKRJ_G0010004	pseudogene	Chr1:23272023-23272592 (-)
BALB/cJ	MGP_BALBcJ_G0010011	pseudogene	Chr1:22787108-22787677 (-)
C3H/HeJ	MGP_C3HHeJ_G0009941	pseudogene	Chr1:23297506-23298075 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010260	pseudogene	Chr1:24575065-24575634 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009030	pseudogene	Chr1:20991515-20992083 (-)
CAST/EiJ	MGP_CASTEiJ_G0009786	pseudogene	Chr1:23356958-23357526 (-)
CBA/J	MGP_CBAJ_G0009915	pseudogene	Chr1:25178598-25179167 (-)
DBA/2J	MGP_DBA2J_G0009937	pseudogene	Chr1:22485637-22486206 (-)
FVB/NJ	MGP_FVBNJ_G0009965	pseudogene	Chr1:22212180-22212749 (-)
LP/J	MGP_LPJ_G0010031	pseudogene	Chr1:23713123-23713692 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009922	pseudogene	Chr1:26220973-26223409 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010235	pseudogene	Chr1:23160186-23160755 (-)
PWK/PhJ	MGP_PWKPhJ_G0009690	pseudogene	Chr1:22219233-22219801 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009508	pseudogene	Chr1:23263800-23264368 (-)
WSB/EiJ	MGP_WSBEiJ_G0009849	pseudogene	Chr1:23141715-23142284 (-)

Homology

• Gene Tree
  Gm29214
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm29214
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101301 (Evidence)
• NCBI Gene
  102632997

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101301	Ensembl Gene Model | MGI Sequence Detail	570	C57BL/6J
transcript	ENSMUST00000190216	Ensembl | MGI Sequence Detail	570	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm29214:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr11148	Chr1:25654612-25654621 (-)	-21 bp